RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 MRGPRFQ96AM1 343 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 WFIKKN1Q96NZ8 548 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 FYTTD1Q96QD9 318 aaKnown RBP16.84■□□□□ 0.29
TRIM47-204ENST00000587339 ALX4Q9H161 411 aaPredicted RBP16.84■□□□□ 0.29
TRIM47-204ENST00000587339 EHFQ9NZC4 300 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 ANXA10Q9UJ72 324 aa16.84■□□□□ 0.29
TRIM47-204ENST00000587339 DPRXA6NFQ7 191 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 OR2AT4A6NND4 320 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 SNRPGP15A8MWD9 76 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 MCRIP1C9JLW8 97 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 HSPB6O14558 160 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 NXPH2O95156 264 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 ACAA1P09110 424 aaPredicted RBP16.83■□□□□ 0.28
TRIM47-204ENST00000587339 BSPH1Q075Z2 132 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 ATPAF1Q5TC12 328 aaPredicted RBP16.83■□□□□ 0.28
TRIM47-204ENST00000587339 PRAMEF6Q5VXH4 476 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 SLC22A25Q6T423 547 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 OVCH2Q7RTZ1 564 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 TERB2Q8NHR7 220 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 NEK7Q8TDX7 302 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 CCDC107Q8WV48 283 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 TLNRD1Q9H1K6 362 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 PPA2Q9H2U2 334 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 NGBQ9NPG2 151 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 CA10Q9NS85 328 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF69Q9UC07 566 aa16.83■□□□□ 0.28
TRIM47-204ENST00000587339 SDCBPO00560 298 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-204ENST00000587339 GMFBP60983 142 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 MPPED2Q15777 294 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF626Q68DY1 528 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 C11orf53Q8IXP5 236 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 OR11H7Q8NGC8 314 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 CADP27708 2225 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 ZSCAN5BA6NJL1 495 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 FAM90A27PA6NNH2 459 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 HS3ST1O14792 307 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 ATXN7O15265 892 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-204ENST00000587339 NOS1APO75052 506 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF44P15621 663 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 CDK10Q15131 360 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 C4orf46Q504U0 113 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF826PQ6ZT77 177 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 ZDHHC22Q8N966 263 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 SUMF2Q8NBJ7 301 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 POC1AQ8NBT0 407 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 CAPSLQ8WWF8 208 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 DMRTB1Q96MA1 342 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 MRPL37Q9BZE1 423 aaKnown RBP16.82■□□□□ 0.28
TRIM47-204ENST00000587339 IFT22Q9H7X7 185 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 CHMP1AQ9HD42 196 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-204ENST00000587339 UFSP2Q9NUQ7 469 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 VSIG4Q9Y279 399 aa16.82■□□□□ 0.28
TRIM47-204ENST00000587339 FBXL19-AS1Q494R0 122 aa16.81■□□□□ 0.28
TRIM47-204ENST00000587339 WDR82Q6UXN9 313 aa16.81■□□□□ 0.28
TRIM47-204ENST00000587339 OR52B4Q8NGK2 314 aa16.81■□□□□ 0.28
TRIM47-204ENST00000587339 GTF3AQ92664 365 aaKnown RBP16.81■□□□□ 0.28
TRIM47-204ENST00000587339 ELMOD3Q96FG2 381 aa16.81■□□□□ 0.28
TRIM47-204ENST00000587339 PKD1L2Q7Z442 2459 aa16.81■□□□□ 0.28
TRIM47-204ENST00000587339 DEGS1O15121 323 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 ADORA2A-AS1P86434 159 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 RBM39Q14498 530 aaKnown RBP16.8■□□□□ 0.28
TRIM47-204ENST00000587339 GRK1Q15835 563 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 ZFP69Q49AA0 526 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 FIP1L1Q6UN15 594 aaKnown RBP16.8■□□□□ 0.28
TRIM47-204ENST00000587339 TCTE3Q8IZS6 198 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 RDH5Q92781 318 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 MRPL24Q96A35 216 aaKnown RBP16.8■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF286AQ9HBT8 521 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 TAAR3PQ9P1P4 343 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 TRAV24A0A0B4J272 114 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 GLAP06280 429 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 OR4E1P0C645 316 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 SULT1A3P0DMM9 295 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 SULT1A4P0DMN0 295 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 CXCL3P19876 107 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 CD200P41217 278 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF146Q15072 292 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 SPIN3Q5JUX0 258 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 C17orf107Q6ZR85 190 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 LILRB4Q8NHJ6 448 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 MARCH1Q8TCQ1 289 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 DPCDQ9BVM2 203 aaPredicted RBP16.8■□□□□ 0.28
TRIM47-204ENST00000587339 HES4Q9HCC6 221 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 MYOZ1Q9NP98 299 aaPredicted RBP16.8■□□□□ 0.28
TRIM47-204ENST00000587339 NECAP2Q9NVZ3 263 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 ZNF222Q9UK12 451 aa16.8■□□□□ 0.28
TRIM47-204ENST00000587339 hCG_1807616A0A1W2PRN6 198 aa16.79■□□□□ 0.28
TRIM47-204ENST00000587339 NAPSAO96009 420 aa16.79■□□□□ 0.28
TRIM47-204ENST00000587339 NPY4RP50391 375 aa16.79■□□□□ 0.28
TRIM47-204ENST00000587339 Q6ZPA2 131 aa16.79■□□□□ 0.28
TRIM47-204ENST00000587339 LHFPL1Q86WI0 220 aa16.79■□□□□ 0.28
TRIM47-204ENST00000587339 RNASE6Q93091 150 aaKnown RBP16.79■□□□□ 0.28
TRIM47-204ENST00000587339 ADGRG4Q8IZF6 3080 aa16.79■□□□□ 0.28
TRIM47-204ENST00000587339 NKX2-6A6NCS4 301 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 SPRY3O43610 288 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 OR5H8P0DN80 308 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 Q6P435 159 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 MUC20Q8N307 709 aaPredicted RBP16.78■□□□□ 0.28
TRIM47-204ENST00000587339 CA5BP1Q8WTZ4 195 aa16.78■□□□□ 0.28
TRIM47-204ENST00000587339 WDR13Q9H1Z4 485 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms