RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 ZNF83P51522 516 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 H2BFSP57053 126 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 IL13RA1P78552 427 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 DHODHQ02127 395 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 TMEM128Q5BJH2 165 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 Q5BKY6 102 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 C11orf88Q6PI97 169 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 ASCC1Q8N9N2 400 aaKnown RBP18.97■□□□□ 0.63
CIRBP-208ENST00000586548 MITD1Q8WV92 249 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 Q9UFV3 132 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 HSPB11Q9Y547 144 aa18.97■□□□□ 0.63
CIRBP-208ENST00000586548 FAM221AA4D161 298 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 OR5H14A6NHG9 310 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 EEF1E1-BLOC1S5C9J1V9 151 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 TIMM8AO60220 97 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-208ENST00000586548 OR5H8P0DN80 308 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 IGFBP7Q16270 282 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 SRSF7Q16629 238 aaKnown RBP eCLIP18.96■□□□□ 0.63
CIRBP-208ENST00000586548 PRR30Q53SZ7 412 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-208ENST00000586548 IFT22Q9H7X7 185 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 OPN4Q9UHM6 478 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 TINAGQ9UJW2 476 aa18.96■□□□□ 0.63
CIRBP-208ENST00000586548 MCRIP1C9JLW8 97 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 M0R1B8 84 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 SIX6O95475 246 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 DUS4LO95620 317 aaKnown RBP18.95■□□□□ 0.62
CIRBP-208ENST00000586548 GLAP06280 429 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 ERVK11-1P61568 191 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 RBPJQ06330 500 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 ZNF154Q13106 437 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 ZNF660Q6AZW8 331 aaPredicted RBP18.95■□□□□ 0.62
CIRBP-208ENST00000586548 LPCAT3Q6P1A2 487 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 SLC22A25Q6T423 547 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 Q6ZS49 121 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 PHB2Q99623 299 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 ZNF2Q9BSG1 426 aaPredicted RBP18.95■□□□□ 0.62
CIRBP-208ENST00000586548 GON7Q9BXV9 100 aa18.95■□□□□ 0.62
CIRBP-208ENST00000586548 H0YL77 283 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 MLNRO43193 412 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 RGS11O94810 467 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 VAMP1P23763 118 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 Q6ZPA2 131 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 GTF3AQ92664 365 aaKnown RBP18.94■□□□□ 0.62
CIRBP-208ENST00000586548 TMEM230Q96A57 120 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 RTBDNQ9BSG5 229 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-208ENST00000586548 CXXC4Q9H2H0 198 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 CHMP1AQ9HD42 196 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-208ENST00000586548 DECR2Q9NUI1 292 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 PRR14LQ5THK1 2151 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 NAPSAO96009 420 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 ACAA1P09110 424 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-208ENST00000586548 PGA5P0DJD9 388 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 HLA-GP17693 338 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 FABP6P51161 128 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 LY6G6FQ5SQ64 297 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 DCAF12L2Q5VW00 463 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 RGS7BPQ6MZT1 257 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-208ENST00000586548 DHRS11Q6UWP2 260 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 SPERTQ8NA61 448 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 OR5M8Q8NGP6 311 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 GRPEL2Q8TAA5 225 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 SPEF1Q9Y4P9 236 aa18.94■□□□□ 0.62
CIRBP-208ENST00000586548 ZGRF1Q86YA3 2104 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 A0A1B0GWJ7 208 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 CRYAAP02489 173 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 PGAM2P15259 253 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 PPP3CBP16298 524 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 DUSP1P28562 367 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 FAM27E3Q08E93 113 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 BAMBIQ13145 260 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 SUMF2Q8NBJ7 301 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 NEK7Q8TDX7 302 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 DHRS9Q9BPW9 319 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 USB1Q9BQ65 265 aaKnown RBP18.93■□□□□ 0.62
CIRBP-208ENST00000586548 NRIP2Q9BQI9 281 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 ELOVL5Q9NYP7 299 aa18.93■□□□□ 0.62
CIRBP-208ENST00000586548 CDIPTO14735 213 aa18.92■□□□□ 0.62
CIRBP-208ENST00000586548 SNRPD2P62316 118 aaKnown RBP18.92■□□□□ 0.62
CIRBP-208ENST00000586548 LIN54Q6MZP7 749 aa18.92■□□□□ 0.62
CIRBP-208ENST00000586548 WDR89Q96FK6 387 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-208ENST00000586548 TMPRSS13Q9BYE2 586 aa18.92■□□□□ 0.62
CIRBP-208ENST00000586548 RIMS4Q9H426 269 aaPredicted RBP18.92■□□□□ 0.62
CIRBP-208ENST00000586548 FZR1Q9UM11 496 aa18.92■□□□□ 0.62
CIRBP-208ENST00000586548 C14orf166Q9Y224 244 aaKnown RBP18.92■□□□□ 0.62
CIRBP-208ENST00000586548 HEATR1Q9H583 2144 aaKnown RBP18.92■□□□□ 0.62
CIRBP-208ENST00000586548 BSNQ9UPA5 3926 aa18.92■□□□□ 0.62
CIRBP-208ENST00000586548 SFT2D2O95562 160 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 SRSF4Q08170 494 aaKnown RBP18.91■□□□□ 0.62
CIRBP-208ENST00000586548 RBM39Q14498 530 aaKnown RBP18.91■□□□□ 0.62
CIRBP-208ENST00000586548 Q6ZR03 302 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 CASTOR1Q8WTX7 329 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 WDR13Q9H1Z4 485 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 Q9N2K0 584 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 TRAV24A0A0B4J272 114 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 NOS1APO75052 506 aaPredicted RBP18.91■□□□□ 0.62
CIRBP-208ENST00000586548 SNAPC5O75971 98 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 GRPP07492 148 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 PI3P19957 117 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 ALKBH2Q6NS38 261 aa18.91■□□□□ 0.62
CIRBP-208ENST00000586548 Q6P435 159 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms