RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 WFDC9Q8NEX5 89 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 OR10H4Q8NGA5 316 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 OR5AU1Q8NGC0 362 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 OR11H6Q8NGC7 330 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 OR52N4Q8NGI2 321 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 RPS4Y2Q8TD47 263 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 LGALS12Q96DT0 336 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 OR4F4Q96R69 305 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 FGF20Q9NP95 211 aaPredicted RBP9.32□□□□□ -0.92
LIG3-207ENST00000586119 ABCB10Q9NRK6 738 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 SCN3BQ9NY72 215 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 MTCH1Q9NZJ7 389 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 IL36RNQ9UBH0 155 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 IKZF2Q9UKS7 526 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 TBL2Q9Y4P3 447 aaKnown RBP9.32□□□□□ -0.92
LIG3-207ENST00000586119 V9GYS6 101 aa9.32□□□□□ -0.92
LIG3-207ENST00000586119 hCG_1809904A0A1W2PP81 198 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 A0A1W2PPE2 198 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 A0A1W2PQL4 384 aaPredicted RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 A0A1W2PR64 198 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 A0A1W2PRV1 198 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 PEX14O75381 377 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 SULT1C4O75897 302 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 IGHA1P01876 353 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 CD33P20138 364 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 MPZP25189 248 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 DUSP1P28562 367 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 VDAC2P45880 294 aaPredicted RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 RIDAP52758 137 aaKnown RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 ACTA2P62736 377 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 ACTG2P63267 376 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 EDDM3AQ14507 147 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 SMN1Q16637 294 aaKnown RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 ARSJQ5FYB0 599 aaPredicted RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 LAIR2Q6ISS4 152 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 ZNF322Q6U7Q0 402 aaPredicted RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 SSX6Q7RTT6 188 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 ELMOD2Q8IZ81 293 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 OR13D1Q8NGV5 346 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 SLAMF9Q96A28 289 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 CNBD2Q96M20 576 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 YTHDF1Q9BYJ9 559 aaKnown RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 CHST6Q9GZX3 395 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 AMBNQ9NP70 447 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 MRM2Q9UI43 246 aaKnown RBP9.31□□□□□ -0.92
LIG3-207ENST00000586119 PSORS1C1Q9UIG5 152 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 OR52A1Q9UKL2 312 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 TPRKBQ9Y3C4 175 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 LRRC42Q9Y546 428 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 COL7A1Q02388 2944 aa9.31□□□□□ -0.92
LIG3-207ENST00000586119 DAPL1A0PJW8 107 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 LOC110117498-PIK3R3F6TDL0 507 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 KRT8P05787 483 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 OR12D2P58182 307 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 MRPL28Q13084 256 aaKnown RBP9.3□□□□□ -0.92
LIG3-207ENST00000586119 UBE2V2Q15819 145 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 ZNF829Q3KNS6 432 aaPredicted RBP9.3□□□□□ -0.92
LIG3-207ENST00000586119 DEFB121Q5J5C9 76 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 RBM48Q5RL73 367 aaKnown RBP9.3□□□□□ -0.92
LIG3-207ENST00000586119 VAX1Q5SQQ9 334 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 UTF1Q5T230 341 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 BPIFB6Q8NFQ5 453 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 OR52I1Q8NGK6 324 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 HAVCR2Q8TDQ0 301 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 GGHQ92820 318 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 ITFG2Q969R8 447 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 TMEM80Q96HE8 168 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 FKBP14Q9NWM8 211 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 CHCHD3Q9NX63 227 aaKnown RBP9.3□□□□□ -0.92
LIG3-207ENST00000586119 BLOC1S6Q9UL45 172 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 DIMT1Q9UNQ2 313 aaKnown RBP9.3□□□□□ -0.92
LIG3-207ENST00000586119 POLDIP2Q9Y2S7 368 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 EXOSC1Q9Y3B2 195 aaKnown RBP9.3□□□□□ -0.92
LIG3-207ENST00000586119 R4GMQ9 66 aa9.3□□□□□ -0.92
LIG3-207ENST00000586119 IGHV2-26A0A0B4J1V2 119 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 FAM172BPA6NC97 362 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 METTL15A6NJ78 407 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 F2RL2O00254 374 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 PSPNO60542 156 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 RPP14O95059 124 aaKnown RBP9.29□□□□□ -0.92
LIG3-207ENST00000586119 APOL3O95236 402 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 CHRM2P08172 466 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 MYL12AP19105 171 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 HOXD3P31249 432 aaPredicted RBP9.29□□□□□ -0.92
LIG3-207ENST00000586119 NPBWR2P48146 333 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 SNU13P55769 128 aaKnown RBP9.29□□□□□ -0.92
LIG3-207ENST00000586119 ZNF85Q03923 595 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 IL24Q13007 206 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 GALEQ14376 348 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 BCL2L15Q5TBC7 163 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 RNLSQ5VYX0 342 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 Q6ZSR3 168 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 GDPD3Q7L5L3 318 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 FAM220AQ7Z4H9 259 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 CENPVQ7Z7K6 275 aaPredicted RBP9.29□□□□□ -0.92
LIG3-207ENST00000586119 SYS1Q8N2H4 156 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 STX19Q8N4C7 294 aa9.29□□□□□ -0.92
LIG3-207ENST00000586119 ZNF676Q8N7Q3 588 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms