RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 ACTC1P68032 377 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 ACTA1P68133 377 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 COL10A1Q03692 680 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 ZNF829Q3KNS6 432 aaPredicted RBP8.34□□□□□ -1.07
CASC3-210ENST00000584997 SLC25A30Q5SVS4 291 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 LDLRAD2Q5SZI1 272 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 MINOS1Q5TGZ0 78 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 LCN1P1Q5VSP4 162 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 CPOQ8IVL8 374 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 OR13F1Q8NGS4 319 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 MYDGFQ969H8 173 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 LGALS12Q96DT0 336 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 ZNF714Q96N38 554 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 NRIP2Q9BQI9 281 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 ZNF649Q9BS31 505 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 MROQ9BYG7 248 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 PBOV1Q9GZY1 135 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 ACOT13Q9NPJ3 140 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 GPR173Q9NS66 373 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 CLN6Q9NWW5 311 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 CLEC2DQ9UHP7 191 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.34□□□□□ -1.07
CASC3-210ENST00000584997 GTF2A1LQ9UNN4 478 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 SLC22A13Q9Y226 551 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 LSM2Q9Y333 95 aaKnown RBP8.34□□□□□ -1.07
CASC3-210ENST00000584997 TPRKBQ9Y3C4 175 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 MINOS1-NBL1R4GNA1 71 aa8.34□□□□□ -1.07
CASC3-210ENST00000584997 DHRS3O75911 302 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 HMGN1P05114 100 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 ALOX5APP20292 161 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 HOXD3P31249 432 aaPredicted RBP8.33□□□□□ -1.08
CASC3-210ENST00000584997 HCCSP53701 268 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 KRTAP10-11P60412 298 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 ST3GAL4Q11206 333 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 CNPY1Q3B7I2 92 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 SLC35D3Q5M8T2 416 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 CLVS2Q5SYC1 327 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 DEGS2Q6QHC5 323 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 SLC16A12Q6ZSM3 486 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 PRSS48Q7RTY5 328 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 C16orf82Q7Z2V1 217 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 ZNF676Q8N7Q3 588 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 OR52I1Q8NGK6 324 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 TEAD3Q99594 435 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 B9D2Q9BPU9 175 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 TTTY10Q9BZA0 68 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 GPR61Q9BZJ8 451 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 YIPF3Q9GZM5 350 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 CCDC90BQ9GZT6 254 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 HES4Q9HCC6 221 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 SCN3BQ9NY72 215 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 NUFIP1Q9UHK0 495 aaKnown RBP8.33□□□□□ -1.08
CASC3-210ENST00000584997 BLOC1S6Q9UL45 172 aa8.33□□□□□ -1.08
CASC3-210ENST00000584997 IGHV2-26A0A0B4J1V2 119 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 hADV38S2A0JD32 116 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 PQLC2LA1A4F0 135 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 MPZL2O60487 215 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 ZNF254O75437 659 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 IGLV3-1P01715 115 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 LPLP06858 475 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 CHRM2P08172 466 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 MRPL3P09001 348 aaKnown RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 MPZP25189 248 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 RIDAP52758 137 aaKnown RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 MEF2CQ06413 473 aaPredicted RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 EGFEM1PQ0D2K5 195 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 DCTN2Q13561 401 aaKnown RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 EDDM3AQ14507 147 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 TBCEQ15813 527 aaPredicted RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 ABCA11PQ4W5N1 156 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 TCTEX1D4Q5JR98 221 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 UBE2UQ5VVX9 321 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 ZNF679Q8IYX0 411 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 OR8H2Q8N162 312 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 TRUB1Q8WWH5 349 aaKnown RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 YIPF6Q96EC8 236 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 RNFT2Q96EX2 444 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 CLEC7AQ9BXN2 247 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 TMEM133Q9H2Q1 129 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 MRPS18AQ9NVS2 196 aaKnown RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 CNOT2Q9NZN8 540 aaKnown RBP8.32□□□□□ -1.08
CASC3-210ENST00000584997 IKZF2Q9UKS7 526 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 SESN1Q9Y6P5 492 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 KIAA2026Q5HYC2 2103 aa8.32□□□□□ -1.08
CASC3-210ENST00000584997 SMIM31A0A1B0GVY4 71 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 EFCAB10A6NFE3 127 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 FAM90A22PA8MWA6 464 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 J3QRE1 110 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 ZNF737O75373 536 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 TTRP02766 147 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 HTR1DP28221 377 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 BRS3P32247 399 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 ETV1P50549 477 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 ARHGDIBP52566 201 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 ERVK11-1P61568 191 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 MFGE8Q08431 387 aaPredicted RBP8.31□□□□□ -1.08
CASC3-210ENST00000584997 IL24Q13007 206 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 SYT6Q5T7P8 510 aaPredicted RBP8.31□□□□□ -1.08
CASC3-210ENST00000584997 GPR107Q5VW38 600 aa8.31□□□□□ -1.08
CASC3-210ENST00000584997 TMEM42Q69YG0 159 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms