RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 DUX4L4P0CJ87 422 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DUX4L5P0CJ88 424 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DUX4L6P0CJ89 424 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DUX4L7P0CJ90 424 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 SELLP14151 372 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 ELK1P19419 428 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 CPT2P23786 658 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 GABRR1P24046 479 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 LMO1P25800 156 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 NR4A2P43354 598 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 PITPNBP48739 271 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 VEGFCP49767 419 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 TMEM50BP56557 158 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DSCR9P59020 149 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 COL10A1Q03692 680 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 IKZF1Q13422 519 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 MPV17LQ2QL34 196 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 TMEM155Q4W5P6 130 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 UBE2NLQ5JXB2 153 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 Q5PR19 223 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DUX4L9Q6RFH8 374 aaPredicted RBP7.95□□□□□ -1.14
RFFL-210ENST00000582308 FIP1L1Q6UN15 594 aaKnown RBP7.95□□□□□ -1.14
RFFL-210ENST00000582308 PRSS57Q6UWY2 283 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 ZNF788Q6ZQV5 615 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 LINC00596Q86U02 117 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 LAX1Q8IWV1 398 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DTX3Q8N9I9 347 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 SDSLQ96GA7 329 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 GAFA1Q96PS6 74 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 PIMREGQ9BSJ6 248 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 C6orf62Q9GZU0 229 aaPredicted RBP7.95□□□□□ -1.14
RFFL-210ENST00000582308 ATG5Q9H1Y0 275 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 NARFLQ9H6Q4 476 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 IFT22Q9H7X7 185 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 PTTG2Q9NZH5 202 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 DUX4Q9UBX2 424 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 GLS2Q9UI32 602 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 MAB21L2Q9Y586 359 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 CSMD1Q96PZ7 3565 aa7.95□□□□□ -1.14
RFFL-210ENST00000582308 METTL21EPA6NDL7 271 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A10PA6NDY2 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A18PA6NE21 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A16PA6NEW6 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A20PA6NIJ5 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A8PA6NJQ4 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A7PA6NKC0 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A22PA8MWA6 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A12PA8MX19 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A5PA8MXJ8 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A23PA8MXZ1 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 SLC33A1O00400 549 aaPredicted RBP7.94□□□□□ -1.14
RFFL-210ENST00000582308 SIGLEC5O15389 551 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 RGS5O15539 181 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 ADAM20O43506 726 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 NDUFA2O43678 99 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 PDCD6O75340 191 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 ZNF737O75373 536 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 CLPXO76031 633 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 CHRM2P08172 466 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A15PP0C7V4 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A13PP0C7W8 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A14PP0C7W9 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM90A24PP0C7X0 464 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 ZNF44P15621 663 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FUT3P21217 361 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 CDK2P24941 298 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 CHATP28329 748 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 BLVRBP30043 206 aaPredicted RBP7.94□□□□□ -1.14
RFFL-210ENST00000582308 KCNJ8Q15842 424 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 PLAC9Q5JTB6 97 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 BRICD5Q6PL45 260 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 C17orf107Q6ZR85 190 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 DCDC5Q6ZRR9 648 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 MUC20Q8N307 709 aaPredicted RBP7.94□□□□□ -1.14
RFFL-210ENST00000582308 FGFRL1Q8N441 504 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FAM216BQ8N7L0 139 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 ZNRF1Q8ND25 227 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 OR4M1Q8NGD0 313 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 OR56B1Q8NGI3 324 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 OR10R2Q8NGX6 335 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 RAB40AQ8WXH6 277 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 CMTM3Q96MX0 182 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 FOXC2Q99958 501 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 SHARPINQ9H0F6 387 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 DNTTIP1Q9H147 329 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 ZNF665Q9H7R5 613 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 RCC2Q9P258 522 aaKnown RBP7.94□□□□□ -1.14
RFFL-210ENST00000582308 KAAG1Q9UBP8 84 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 CTSZQ9UBR2 303 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 PEX16Q9Y5Y5 336 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 ZANQ9Y493 2812 aa7.94□□□□□ -1.14
RFFL-210ENST00000582308 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.94□□□□□ -1.146e-8■■□□□ 12.2
RFFL-210ENST00000582308 IGHV4-61A0A0C4DH41 118 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 FAM25AB3EWG3 89 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 FAM25CB3EWG5 89 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 FAM25GB3EWG6 89 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 F5H0A9 414 aaPredicted RBP7.93□□□□□ -1.14
RFFL-210ENST00000582308 K7N7A8 449 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 TMPRSS2O15393 492 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 PSPNO60542 156 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms