RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 MAPK3P27361 379 aaPredicted RBP12.89□□□□□ -0.35
NCBP3-207ENST00000577169 MTNR1BP49286 362 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 GP2P55259 537 aaKnown RBP12.89□□□□□ -0.35
NCBP3-207ENST00000577169 EDDM3BP56851 147 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
NCBP3-207ENST00000577169 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
NCBP3-207ENST00000577169 RSU1Q15404 277 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 FAM27D1Q5T7N8 215 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 RUSC1-AS1Q66K80 236 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 Q6P435 159 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 USP43Q70EL4 1123 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 GDPD3Q7L5L3 318 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 CEACAM19Q7Z692 300 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 PDZD9Q8IXQ8 264 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 OR8H2Q8N162 312 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 SIGLECL1Q8N7X8 197 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 OR4S1Q8NGB4 309 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 THRSPQ92748 146 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 ZNF48Q96MX3 618 aaPredicted RBP12.89□□□□□ -0.35
NCBP3-207ENST00000577169 CHST6Q9GZX3 395 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 METTL9Q9H1A3 318 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 SIRT7Q9NRC8 400 aa12.89□□□□□ -0.35
NCBP3-207ENST00000577169 IGHV1-69DA0A0B4J2H0 117 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 A0A0G2JK05 382 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 IGHV1-69P01742 117 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 ZNF44P15621 663 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 BMXP51813 675 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 BPIFB3P59826 476 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 GABARAPL2P60520 117 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 EMX1Q04741 257 aaPredicted RBP12.88□□□□□ -0.35
NCBP3-207ENST00000577169 BLMHQ13867 455 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 TBCEQ15813 527 aaPredicted RBP12.88□□□□□ -0.35
NCBP3-207ENST00000577169 GRK1Q15835 563 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 C9orf139Q6ZV77 190 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 CDH26Q8IXH8 852 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 Q8NFD4 153 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 TBC1D15Q8TC07 691 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 TMEM158Q8WZ71 300 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 S100A13Q99584 98 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 SF3B6Q9Y3B4 125 aaKnown RBP12.88□□□□□ -0.35
NCBP3-207ENST00000577169 LRRC42Q9Y546 428 aa12.88□□□□□ -0.35
NCBP3-207ENST00000577169 MEX3AA1L020 520 aaKnown RBP12.87□□□□□ -0.35
NCBP3-207ENST00000577169 RNF212BA8MTL3 300 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 RRP9O43818 475 aaKnown RBP12.87□□□□□ -0.35
NCBP3-207ENST00000577169 MRPS14O60783 128 aaKnown RBP12.87□□□□□ -0.35
NCBP3-207ENST00000577169 SC5DO75845 299 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 CCL3L1P16619 93 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 PRTN3P24158 256 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 OR3A1P47881 315 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 HILS1P60008 231 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 RPS25P62851 125 aaKnown RBP12.87□□□□□ -0.35
NCBP3-207ENST00000577169 EDDM3AQ14507 147 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 ZNF273Q14593 569 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 KRTAP24-1Q3LI83 254 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 TMEM91Q6ZNR0 172 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 PHC2Q8IXK0 858 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 JAGN1Q8N5M9 183 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 C11orf42Q8N5U0 333 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 TPRX1Q8N7U7 411 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 OR51T1Q8NGJ9 327 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 TNFRSF14Q92956 283 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 MUL1Q969V5 352 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 PPIL3Q9H2H8 161 aaKnown RBP12.87□□□□□ -0.35
NCBP3-207ENST00000577169 METTL8Q9H825 291 aaKnown RBP12.87□□□□□ -0.35
NCBP3-207ENST00000577169 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
NCBP3-207ENST00000577169 SVEP1Q4LDE5 3571 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 A0A1W2PPH5 198 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 A0A1W2PRD5 423 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 A0A1W2PRF3 423 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 A0A1W2PRM7 423 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 MEGF11A6BM72 1044 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 RNASEK-C17orf49H0YIS7 233 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 MGST3O14880 152 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 CSTBP04080 98 aaKnown RBP12.86□□□□□ -0.35
NCBP3-207ENST00000577169 SRMP19623 302 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 KLRD1Q13241 179 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 TRAM1Q15629 374 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 DEFB112Q30KQ8 113 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 METAP1DQ6UB28 335 aaPredicted RBP12.86□□□□□ -0.35
NCBP3-207ENST00000577169 RBMS3Q6XE24 437 aaKnown RBP12.86□□□□□ -0.35
NCBP3-207ENST00000577169 ZNF367Q7RTV3 350 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 LRRTM1Q86UE6 522 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 LYPD6Q86Y78 171 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 SPARTQ8N0X7 666 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 ZDHHC22Q8N966 263 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 JMJD8Q96S16 334 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 ESM1Q9NQ30 184 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 IL36GQ9NZH8 169 aa12.86□□□□□ -0.35
NCBP3-207ENST00000577169 MRPS28Q9Y2Q9 187 aaKnown RBP12.86□□□□□ -0.35
NCBP3-207ENST00000577169 MDFIC2A0A1B0GVS7 189 aa12.85□□□□□ -0.35
NCBP3-207ENST00000577169 A0A1W2PP11 408 aa12.85□□□□□ -0.35
NCBP3-207ENST00000577169 SLC33A1O00400 549 aaPredicted RBP12.85□□□□□ -0.35
NCBP3-207ENST00000577169 UCHL1P09936 223 aa12.85□□□□□ -0.35
NCBP3-207ENST00000577169 SERPINA2P20848 420 aa12.85□□□□□ -0.35
NCBP3-207ENST00000577169 ERP29P30040 261 aaKnown RBP12.85□□□□□ -0.35
NCBP3-207ENST00000577169 DLX6P56179 175 aa12.85□□□□□ -0.35
NCBP3-207ENST00000577169 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms