RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SLC25A33Q9BSK2 321 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 RIBC2Q9H4K1 309 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 DPM3Q9P2X0 92 aa6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 WARS2Q9UGM6 360 aaKnown RBP6.88□□□□□ -1.31
CTDNEP1-203ENST00000570385 TRGV10A0A0A0MS01 117 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 IGKV1-12A0A0C4DH73 117 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 TRBV2A0A0J9YWF9 115 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 WI2-2373I1.2A0A1W2PRP0 233 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 MGST3O14880 152 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 SULT1C4O75897 302 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR2H2O95918 312 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 CYB5AP00167 134 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 IGKV1D-12P01611 117 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 ALDOBP05062 364 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 OCM2P0CE71 109 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 OCMP0CE72 109 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 ATF1P18846 271 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 AZGP1P25311 298 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 HTR1FP30939 366 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 HOXD3P31249 432 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 KRTAP10-11P60412 298 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF85Q03923 595 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 KPNB1Q14974 876 aaKnown RBP6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 ATP6AP1Q15904 470 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 C11orf87Q6NUJ2 197 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 FAM220AQ7Z4H9 259 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZDHHC13Q8IUH4 622 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 ENTHD1Q8IYW4 607 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 WFDC9Q8NEX5 89 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR10AC1Q8NH08 325 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 RNF166Q96A37 237 aaPredicted RBP6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 EME1Q96AY2 570 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF286AQ9HBT8 521 aa6.87□□□□□ -1.31
CTDNEP1-203ENST00000570385 LEUTXA8MZ59 168 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 H3BUI4 141 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 HSPB6O14558 160 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 TOR1AO14656 332 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 SH2D1BO14796 132 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 AMY1AP04745 511 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 AMY2AP04746 511 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 UBCP0CG48 685 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF44P15621 663 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF20P17024 532 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 PRKACBP22694 351 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 NFYBP25208 207 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 FASP25445 335 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 BRS3P32247 399 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR3A4PP47883 348 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 NANOS3P60323 173 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 BDH1Q02338 343 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 PDZK1IP1Q13113 114 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 IL18R1Q13478 541 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 ATXN7L3Q14CW9 347 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF146Q15072 292 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZBTB49Q6ZSB9 765 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF329Q86UD4 541 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 Q8IYB0 196 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR51A4Q8NGJ6 313 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR13C9Q8NGT0 318 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR2G2Q8NGZ5 317 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 LEAP2Q969E1 77 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 AKR1E2Q96JD6 320 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 GAL3ST2Q9H3Q3 398 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 LIN7BQ9HAP6 207 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 NEK6Q9HC98 313 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 HMG20AQ9NP66 347 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 EXOSC4Q9NPD3 245 aaKnown RBP6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 INPP5EQ9NRR6 644 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 FRRS1LQ9P0K9 344 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 AASSQ9UDR5 926 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 GLS2Q9UI32 602 aa6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 UBE2J1Q9Y385 318 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 TSSC4Q9Y5U2 329 aaPredicted RBP6.86□□□□□ -1.31
CTDNEP1-203ENST00000570385 ODAMA1E959 279 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 SAC3D1A6NKF1 404 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 BUB1B-PAK6H3BSN5 160 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR2F2O95006 317 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 IGLV1-47P01700 117 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 CCDC159P0C7I6 412 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 ERP29P30040 261 aaKnown RBP6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 PTGFRP43088 359 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 SLC35A2P78381 396 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 HNF4GQ14541 408 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 LTC4SQ16873 150 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 HLA-DRB5Q30154 266 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 KRBOX4Q5JUW0 171 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 SPIN3Q5JUX0 258 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 VAX1Q5SQQ9 334 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 TPTE2P1Q5T6R2 138 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 TMEM244Q5VVB8 128 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR52W1Q6IF63 320 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 HEPN1Q6WQI6 88 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 LHFPL2Q6ZUX7 228 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 DNAAF1Q8NEP3 725 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR4X2Q8NGF9 303 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR8J1Q8NGP2 316 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 OR13C3Q8NGS6 347 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 ZNF596Q8TC21 504 aa6.85□□□□□ -1.31
CTDNEP1-203ENST00000570385 PP6455Q8WZ26 134 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms