RNA–Protein interactions for RNA: ENST00000570296.1

CLK3-227, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-227ENST00000570296 EBI3Q14213 229 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 TMEM65Q6PI78 240 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 ASRGL1Q7L266 308 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 COMMD2Q86X83 199 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 CATSPERDQ86XM0 798 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 SLC15A3Q8IY34 581 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 OR4D6Q8NGJ1 314 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 RP9Q8TA86 221 aaKnown RBP13.91□□□□□ -0.18
CLK3-227ENST00000570296 CEP19Q96LK0 163 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 KCTD7Q96MP8 289 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 FAM110AQ9BQ89 295 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 EGLN3Q9H6Z9 239 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 GID8Q9NWU2 228 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 ACTR3BQ9P1U1 418 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 VPS13DQ5THJ4 4388 aa13.91□□□□□ -0.18
CLK3-227ENST00000570296 ACOD1A6NK06 481 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 C12orf77C9JDV5 145 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 F8VVB4 439 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 F8VWA3 439 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 MPZL2O60487 215 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 IGF1P05019 195 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 LYNP07948 512 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 ZP1P60852 638 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 KLF10Q13118 480 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 MADCAM1Q13477 382 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 CLVS2Q5SYC1 327 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 TMEM42Q69YG0 159 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 ANGPTL5Q86XS5 388 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 ENTHD1Q8IYW4 607 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 Q8N9W7 124 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 C7orf34Q96L11 122 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 OR5B12Q96R08 314 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 CHCHD6Q9BRQ6 235 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 TUBA4BQ9H853 241 aa13.9□□□□□ -0.18
CLK3-227ENST00000570296 DLGAP1O14490 977 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 GSTA4O15217 222 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 DIRAS1O95057 198 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 IGLV3-1P01715 115 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 GSTT1P30711 240 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 PTGFRP43088 359 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 SLURP1P55000 103 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 PITPNAQ00169 270 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 Q8N6K4 173 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 ZNF454Q8N9F8 522 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 GNPDA2Q8TDQ7 276 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 KLK15Q9H2R5 256 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 GPR84Q9NQS5 396 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 GPR173Q9NS66 373 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
CLK3-227ENST00000570296 FUOMA2VDF0 154 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 FAM183AA6NL82 134 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 LINC01619G3V211 115 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 DHRS3O75911 302 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 GADD45GO95257 159 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 IGLV1-51P01701 117 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 FSTP19883 344 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 OR3A1P47881 315 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 ZNF91Q05481 1191 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 UTF1Q5T230 341 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 OTOSQ8NHW6 89 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 OR51E1Q8TCB6 317 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 EAF1Q96JC9 268 aaPredicted RBP13.88□□□□□ -0.19
CLK3-227ENST00000570296 NABP2Q9BQ15 211 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 IL20Q9NYY1 176 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 GMPR2Q9P2T1 348 aaKnown RBP13.88□□□□□ -0.19
CLK3-227ENST00000570296 STUB1Q9UNE7 303 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 U3KQV3 271 aa13.88□□□□□ -0.19
CLK3-227ENST00000570296 NUPR2A6NF83 97 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 J3QR06 171 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 MED14OSP0DP75 135 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 METTL21CQ5VZV1 264 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 FAM53AQ6NSI3 398 aaPredicted RBP13.87□□□□□ -0.19
CLK3-227ENST00000570296 IZUMO1Q8IYV9 350 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 THEM6Q8WUY1 208 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 RNF166Q96A37 237 aaPredicted RBP13.87□□□□□ -0.19
CLK3-227ENST00000570296 RASL11BQ9BPW5 248 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 HSPB9Q9BQS6 159 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 TMED9Q9BVK6 235 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 CMTM6Q9NX76 183 aa13.87□□□□□ -0.19
CLK3-227ENST00000570296 DNAH6Q9C0G6 4158 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 NFYBP25208 207 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 NUDT2P50583 147 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 CDC42P60953 191 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 LIPEQ05469 1076 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 ARPINQ7Z6K5 226 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 HAPLN4Q86UW8 402 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 OR8D4Q8NGM9 314 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 OR2T10Q8NGZ9 312 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 HAVCR2Q8TDQ0 301 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 EMG1Q92979 244 aaKnown RBP13.86□□□□□ -0.19
CLK3-227ENST00000570296 FAM162AQ96A26 154 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 SLAMF9Q96A28 289 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 TEAD3Q99594 435 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 FAM206AQ9NX38 181 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 BAIAP2Q9UQB8 552 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 MRPS28Q9Y2Q9 187 aaKnown RBP13.86□□□□□ -0.19
CLK3-227ENST00000570296 CEPT1Q9Y6K0 416 aa13.86□□□□□ -0.19
CLK3-227ENST00000570296 DEDDO75618 318 aa13.85□□□□□ -0.19
CLK3-227ENST00000570296 IFNGP01579 166 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms