RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ALDH3A2P51648 485 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 ARHGDIBP52566 201 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 P2RX3P56373 397 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 EDDM3AQ14507 147 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 NDUFA11Q86Y39 141 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 DYNAPQ8N1N2 210 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 OR4S1Q8NGB4 309 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 OR52N4Q8NGI2 321 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 ZNF596Q8TC21 504 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 AKR1E2Q96JD6 320 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 Q96MT0 163 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 NKX3-1Q99801 234 aaPredicted RBP9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 COMMD4Q9H0A8 199 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 EXOSC4Q9NPD3 245 aaKnown RBP9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 INPP5EQ9NRR6 644 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 SERTAD4Q9NUC0 356 aa9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 RBFOX1Q9NWB1 397 aaKnown RBP9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 RRP15Q9Y3B9 282 aaKnown RBP9.82□□□□□ -0.84
GTF3C1-204ENST00000564664 OR4C45A6NMZ5 311 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 H3BSH0 61 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 F2RL2O00254 374 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 PEX14O75381 377 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 KDM4BO94953 1096 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 INMTO95050 263 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 CSN2P05814 226 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 BRS3P32247 399 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 OR3A1P47881 315 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 POU3F4P49335 361 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 BDH1Q02338 343 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 ALKBH1Q13686 389 aaKnown RBP9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 GALEQ14376 348 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 LDLRAD2Q5SZI1 272 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 KPRPQ5T749 579 aaPredicted RBP9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 HEPN1Q6WQI6 88 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 TCF23Q7RTU1 214 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 REC114Q7Z4M0 266 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 SERPINA12Q8IW75 414 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 SYS1Q8N2H4 156 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 OR4F17Q8NGA8 305 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 OR5D14Q8NGL3 314 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 NDNFQ8TB73 568 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 WIPF2Q8TF74 440 aaPredicted RBP9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 OR4F4Q96R69 305 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 WNT10AQ9GZT5 417 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 CHST6Q9GZX3 395 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 NCOR1P1Q9H4R4 102 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 ZCCHC4Q9H5U6 513 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 DPM3Q9P2X0 92 aa9.81□□□□□ -0.84
GTF3C1-204ENST00000564664 LEUTXA8MZ59 168 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 J3QLW9 94 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 FADS2O95864 444 aaKnown RBP9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 DBTP11182 482 aaKnown RBP9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 ZNF19P17023 458 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 DUSP1P28562 367 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 CD34P28906 385 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 PRRX1P54821 245 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 NANOS3P60323 173 aaKnown RBP9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 SLC34A1Q06495 639 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 KPNB1Q14974 876 aaKnown RBP9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 TRAPPC6BQ86SZ2 158 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 ABHD12Q8N2K0 398 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 OR13C3Q8NGS6 347 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 PYDC1Q8WXC3 89 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 STMN2Q93045 179 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 PELI1Q96FA3 418 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 CPNE2Q96FN4 548 aaPredicted RBP9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 LIN7BQ9HAP6 207 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 GSTK1Q9Y2Q3 226 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 HILPDAQ9Y5L2 63 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 NOTCH3Q9UM47 2321 aa9.8□□□□□ -0.84
GTF3C1-204ENST00000564664 PLXNB1O43157 2135 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 TMEM212A6NML5 194 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 OOSP1A8MZH6 123 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 DEGS1O15121 323 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 OR2H2O95918 312 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 CCDC159P0C7I6 412 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 CEACAM3P40198 252 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 RAB40BQ12829 278 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 BEAN1Q3B7T3 259 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 PLA1AQ53H76 456 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 FBLN7Q53RD9 439 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 SAMD5Q5TGI4 173 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 CCDC144NLQ6NUI1 221 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 TMEM219Q86XT9 240 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 PARP16Q8N5Y8 322 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 TPRX1Q8N7U7 411 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 C11orf44Q8N8P7 122 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 ZNF565Q8N9K5 539 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 OR4D6Q8NGJ1 314 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 OR4P4Q8NGL7 312 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 RHOXF1Q8NHV9 184 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 CAPSLQ8WWF8 208 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 LGALS12Q96DT0 336 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 C4orf36Q96KX1 117 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 MRPS18AQ9NVS2 196 aaKnown RBP9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 OR6C3Q9NZP0 311 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 IL36RNQ9UBH0 155 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 GMPPBQ9Y5P6 360 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 KIAA2026Q5HYC2 2103 aa9.79□□□□□ -0.84
GTF3C1-204ENST00000564664 A0A087X0M5 115 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms