RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 MCEMP1Q8IX19 187 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ZDHHC23Q8IYP9 409 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 OR5D18Q8NGL1 313 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 NPRL2Q8WTW4 380 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 MALSU1Q96EH3 234 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 RRNAD1Q96FB5 475 aaKnown RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 AKR1E2Q96JD6 320 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 BTF3L4Q96K17 158 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 C18orf12Q96KH6 178 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TMEM56Q96MV1 263 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF385AQ96PM9 386 aaKnown RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 RAB40CQ96S21 281 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 NKX3-1Q99801 234 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 FAM173AQ9BQD7 235 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 FAAP24Q9BTP7 215 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 EGLN1Q9GZT9 426 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TMEM222Q9H0R3 208 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TLNRD1Q9H1K6 362 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 HIPK2Q9H2X6 1198 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 GP6Q9HCN6 339 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 SH2D2AQ9NP31 389 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF319Q9P2F9 582 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 PILRBQ9UKJ0 227 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 NOSIPQ9Y314 301 aaKnown RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TMEM56-RWDD3S4R434 201 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 FREM3P0C091 2139 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 TP53BP1Q12888 1972 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 IGKV3D-15A0A087WSY6 115 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 A0A087WWC5 75 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 TRBV6-6A0A0A6YYG2 114 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 A0A0J9YW62 118 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 A0A1B0GU03 582 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 CLEC18AA5D8T8 446 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF98A6NK75 572 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 FAM74A7A6NL05 159 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 C17orf51A8MQB3 221 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF724A8MTY0 619 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 K7ESF4 209 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 NTN3O00634 580 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 EREGO14944 169 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 DEGS1O15121 323 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 TRAPPC6AO75865 159 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 OR7C1O76099 320 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 CNOT4O95628 575 aaKnown RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 F10P00742 488 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 SERPINE2P07093 398 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 CCL3P10147 92 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 SELEP16581 610 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF14P17017 642 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF32P17041 273 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 PI3P19957 117 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 TUBG1P23258 451 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 LPAR6P43657 344 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 FXYD4P59646 89 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 ZFP36L1Q07352 338 aaKnown RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 CEACAM16Q2WEN9 425 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 CEACAM21Q3KPI0 293 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 FAM74A3Q4VXF1 159 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 MIDNQ504T8 468 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 LCN10Q6JVE6 187 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 ATRAIDQ6UW56 229 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 C6orf15Q6UXA7 325 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 C1QL4Q86Z23 238 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 C1orf174Q8IYL3 243 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 FBXL14Q8N1E6 418 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 TCTEX1D1Q8N7M0 179 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 CLEC18CQ8NCF0 446 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 DMBX1Q8NFW5 382 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 OR5D13Q8NGL4 314 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 OR10G4Q8NGN3 311 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 OR4A4PQ8NGN8 299 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 OR2I1PQ8NGU4 316 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 LILRB1Q8NHL6 650 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 RNASE11Q8TAA1 199 aaKnown RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 SCGB1C1Q8TD33 95 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 NEK7Q8TDX7 302 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 FAM216AQ8WUB2 273 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 PIGCQ92535 297 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 PINX1Q96BK5 328 aaKnown RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 FBXO17Q96EF6 278 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 LIN37Q96GY3 246 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 GNRHR2Q96P88 292 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 DMRTA2Q96SC8 542 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 GPR87Q9BY21 358 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 PRRG4Q9BZD6 226 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 GPR35Q9HC97 309 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 TUBG2Q9NRH3 451 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 LYRM2Q9NU23 88 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-249ENST00000564606 TREM2Q9NZC2 230 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 KIAA1456Q9P272 454 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 POLDIP2Q9Y2S7 368 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 MMP24Q9Y5R2 645 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 HS3ST3B1Q9Y662 390 aa6.62□□□□□ -1.35
ATXN3-249ENST00000564606 MSGN1A6NI15 193 aa6.61□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF716A6NP11 495 aa6.61□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF732B4DXR9 585 aa6.61□□□□□ -1.35
ATXN3-249ENST00000564606 FAM90A26D6RGX4 464 aa6.61□□□□□ -1.35
ATXN3-249ENST00000564606 H0Y980 276 aa6.61□□□□□ -1.35
ATXN3-249ENST00000564606 LAMTOR5O43504 91 aa6.61□□□□□ -1.35
ATXN3-249ENST00000564606 TIAF1O95411 115 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms