RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TMEM249Q2WGJ8 235 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 CEACAM21Q3KPI0 293 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 KLHL12Q53G59 568 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 THOC7Q6I9Y2 204 aaKnown RBP1.15□□□□□ -2.23
CHD9-211ENST00000564600 SSX6Q7RTT6 188 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 CYP4Z1Q86W10 505 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 LRRC8AQ8IWT6 810 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 SLC25A45Q8N413 288 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 ZDHHC22Q8N966 263 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 OR1P1Q8NH06 330 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 CCDC124Q96CT7 223 aaKnown RBP1.15□□□□□ -2.23
CHD9-211ENST00000564600 SMIM8Q96KF7 97 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 CFAP53Q96M91 514 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 QKIQ96PU8 341 aaKnown RBP eCLIP1.15□□□□□ -2.23
CHD9-211ENST00000564600 PITX2Q99697 317 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 DHX35Q9H5Z1 703 aaKnown RBP1.15□□□□□ -2.23
CHD9-211ENST00000564600 TRIM45Q9H8W5 580 aaPredicted RBP1.15□□□□□ -2.23
CHD9-211ENST00000564600 OR2S2Q9NQN1 319 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 DIABLOQ9NR28 239 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 INIPQ9NRY2 104 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 AGPAT3Q9NRZ7 376 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 TAS2R1Q9NYW7 299 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 DNAJC27Q9NZQ0 273 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 ZNF230Q9UIE0 474 aaPredicted RBP1.15□□□□□ -2.23
CHD9-211ENST00000564600 NXT1Q9UKK6 140 aaKnown RBP1.15□□□□□ -2.23
CHD9-211ENST00000564600 RAB22AQ9UL26 194 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 RAB23Q9ULC3 237 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 INSIG2Q9Y5U4 225 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 POLR3AO14802 1390 aaPredicted RBP1.15□□□□□ -2.23
CHD9-211ENST00000564600 PIK3R4Q99570 1358 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 VWA8A3KMH1 1905 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 MIA3Q5JRA6 1907 aa1.15□□□□□ -2.23
CHD9-211ENST00000564600 LOC389332A0A1B0GUA5 103 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 MGAT4DA6NG13 374 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 C4orf51C9J302 202 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 hCG_2039718K7EN88 272 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 SGCEO43556 437 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 SHOX2O60902 331 aaPredicted RBP1.14□□□□□ -2.23
CHD9-211ENST00000564600 OR2A4O95047 310 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 SLC35E2BP0CK96 405 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 LGALS3P17931 250 aaKnown RBP1.14□□□□□ -2.23
CHD9-211ENST00000564600 TAC1P20366 129 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 SLC6A1P30531 599 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 TSPOP30536 169 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 DEKP35659 375 aaKnown RBP1.14□□□□□ -2.23
CHD9-211ENST00000564600 PMVKQ15126 192 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 ELOCQ15369 112 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 SSX1Q16384 188 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 BSXQ3C1V8 233 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 FAM183BPQ6ZVS7 135 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 ZIC4Q8N9L1 334 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 C1orf64Q8NEQ6 169 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 FAM45AQ8TCE6 357 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 ING5Q8WYH8 240 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 YPEL4Q96NS1 127 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 GPR82Q96P67 336 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 OR2A7Q96R45 310 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 APOL4Q9BPW4 351 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 UTP23Q9BRU9 249 aaKnown RBP1.14□□□□□ -2.23
CHD9-211ENST00000564600 HINT2Q9BX68 163 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 UGT2B28Q9BY64 529 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 MRPL20Q9BYC9 149 aaKnown RBP1.14□□□□□ -2.23
CHD9-211ENST00000564600 TMEM100Q9NV29 134 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 MRM2Q9UI43 246 aaKnown RBP1.14□□□□□ -2.23
CHD9-211ENST00000564600 RWDD2AQ9UIY3 292 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 GMEB1Q9Y692 573 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 SLC22A7Q9Y694 548 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 ENPP4Q9Y6X5 453 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 SPATA31E1Q6ZUB1 1445 aa1.14□□□□□ -2.23
CHD9-211ENST00000564600 YLPM1P49750 1951 aaKnown RBP1.14□□□□□ -2.23
CHD9-211ENST00000564600 PLXNB1O43157 2135 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 BAZ1BQ9UIG0 1483 aaKnown RBP1.13□□□□□ -2.23
CHD9-211ENST00000564600 RAB3GAP2Q9H2M9 1393 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 IGKV2-24A0A0C4DH68 120 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 A0A1W2PRG6 482 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 OR6C70A6NIJ9 312 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 MKRN2OSH3BPM6 223 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 PHYHO14832 338 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 SLC31A1O15431 190 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 PDCD6O75340 191 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 MYO1DO94832 1006 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 PTTG1O95997 202 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 PFN1P07737 140 aaKnown RBP1.13□□□□□ -2.23
CHD9-211ENST00000564600 SLC2A1P11166 492 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 IMPA1P29218 277 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 TGFBR1P36897 503 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 LGALS7P47929 136 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 GDI2P50395 445 aaKnown RBP1.13□□□□□ -2.23
CHD9-211ENST00000564600 XKP51811 444 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 IL5RAQ01344 420 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 SYCP1Q15431 976 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 LRRC26Q2I0M4 334 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 RBM48Q5RL73 367 aaKnown RBP1.13□□□□□ -2.23
CHD9-211ENST00000564600 Q6ZQT7 251 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 USP50Q70EL3 339 aaPredicted RBP1.13□□□□□ -2.23
CHD9-211ENST00000564600 PRNTQ86SH4 94 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 SPATA24Q86W54 205 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 CCNYL1Q8N7R7 359 aa1.13□□□□□ -2.23
CHD9-211ENST00000564600 DRAXINQ8NBI3 349 aaPredicted RBP1.13□□□□□ -2.23
CHD9-211ENST00000564600 ZNF738Q8NE65 137 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms