RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 VMO1Q7Z5L0 202 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 PHC2Q8IXK0 858 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 SPARTQ8N0X7 666 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 OR8H2Q8N162 312 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 MS4A15Q8N5U1 240 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 OR4S1Q8NGB4 309 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 OR4M1Q8NGD0 313 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 OR51T1Q8NGJ9 327 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 OR10K1Q8NGX5 313 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 UFD1Q92890 307 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 TMEM203Q969S6 136 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 SNX22Q96L94 193 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 C1orf147Q96MC9 270 aaPredicted RBP7.01□□□□□ -1.29
UBR1-204ENST00000563239 MGLLQ99685 303 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 YTHDF1Q9BYJ9 559 aaKnown RBP7.01□□□□□ -1.29
UBR1-204ENST00000563239 Q9H521 79 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 ESM1Q9NQ30 184 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 IL36GQ9NZH8 169 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 ZNF581Q9P0T4 197 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 ONECUT1Q9UBC0 465 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 BLOC1S6Q9UL45 172 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 GSTK1Q9Y2Q3 226 aa7.01□□□□□ -1.29
UBR1-204ENST00000563239 TENM1Q9UKZ4 2725 aa7□□□□□ -1.29
UBR1-204ENST00000563239 TRAV24A0A0B4J272 114 aa7□□□□□ -1.29
UBR1-204ENST00000563239 A0A0G2JK05 382 aa7□□□□□ -1.29
UBR1-204ENST00000563239 A0A1W2PP11 408 aa7□□□□□ -1.29
UBR1-204ENST00000563239 RNASEK-C17orf49H0YIS7 233 aa7□□□□□ -1.29
UBR1-204ENST00000563239 M0R1W7 72 aa7□□□□□ -1.29
UBR1-204ENST00000563239 SIRPB1O00241 398 aa7□□□□□ -1.29
UBR1-204ENST00000563239 SLC33A1O00400 549 aaPredicted RBP7□□□□□ -1.29
UBR1-204ENST00000563239 MAGEB3O15480 346 aa7□□□□□ -1.29
UBR1-204ENST00000563239 TCF21O43680 179 aa7□□□□□ -1.29
UBR1-204ENST00000563239 MRPS14O60783 128 aaKnown RBP7□□□□□ -1.29
UBR1-204ENST00000563239 MAS1P04201 325 aa7□□□□□ -1.29
UBR1-204ENST00000563239 UCHL1P09936 223 aa7□□□□□ -1.29
UBR1-204ENST00000563239 HSMCR30P0CW71 290 aa7□□□□□ -1.29
UBR1-204ENST00000563239 CCL3L1P16619 93 aa7□□□□□ -1.29
UBR1-204ENST00000563239 EEF1B2P24534 225 aaKnown RBP7□□□□□ -1.29
UBR1-204ENST00000563239 MTNR1BP49286 362 aa7□□□□□ -1.29
UBR1-204ENST00000563239 HILS1P60008 231 aa7□□□□□ -1.29
UBR1-204ENST00000563239 RPL31P62899 125 aaKnown RBP7□□□□□ -1.29
UBR1-204ENST00000563239 FABP5Q01469 135 aa7□□□□□ -1.29
UBR1-204ENST00000563239 PIGYQ3MUY2 71 aa7□□□□□ -1.29
UBR1-204ENST00000563239 UBE2UQ5VVX9 321 aa7□□□□□ -1.29
UBR1-204ENST00000563239 BRD3OSQ6XYD6 125 aa7□□□□□ -1.29
UBR1-204ENST00000563239 USP43Q70EL4 1123 aa7□□□□□ -1.29
UBR1-204ENST00000563239 ZNF367Q7RTV3 350 aa7□□□□□ -1.29
UBR1-204ENST00000563239 CEACAM19Q7Z692 300 aa7□□□□□ -1.29
UBR1-204ENST00000563239 CDH26Q8IXH8 852 aa7□□□□□ -1.29
UBR1-204ENST00000563239 FAM185AQ8N0U4 392 aa7□□□□□ -1.29
UBR1-204ENST00000563239 SIGLECL1Q8N7X8 197 aa7□□□□□ -1.29
UBR1-204ENST00000563239 ZDHHC22Q8N966 263 aa7□□□□□ -1.29
UBR1-204ENST00000563239 ASCC1Q8N9N2 400 aaKnown RBP7□□□□□ -1.29
UBR1-204ENST00000563239 OR4D6Q8NGJ1 314 aa7□□□□□ -1.29
UBR1-204ENST00000563239 LHX4Q969G2 390 aa7□□□□□ -1.29
UBR1-204ENST00000563239 MUL1Q969V5 352 aa7□□□□□ -1.29
UBR1-204ENST00000563239 GPER1Q99527 375 aa7□□□□□ -1.29
UBR1-204ENST00000563239 GFI1Q99684 422 aa7□□□□□ -1.29
UBR1-204ENST00000563239 CHST6Q9GZX3 395 aa7□□□□□ -1.29
UBR1-204ENST00000563239 PRDM13Q9H4Q3 707 aa7□□□□□ -1.29
UBR1-204ENST00000563239 UNKLQ9H9P5 680 aaKnown RBP7□□□□□ -1.29
UBR1-204ENST00000563239 EXOSC4Q9NPD3 245 aaKnown RBP7□□□□□ -1.29
UBR1-204ENST00000563239 SIRT7Q9NRC8 400 aa7□□□□□ -1.29
UBR1-204ENST00000563239 CKLFQ9UBR5 152 aa7□□□□□ -1.29
UBR1-204ENST00000563239 ING4Q9UNL4 249 aa7□□□□□ -1.29
UBR1-204ENST00000563239 LRRC42Q9Y546 428 aa7□□□□□ -1.29
UBR1-204ENST00000563239 A0A0A6YYJ9 748 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 IGHV1-69DA0A0B4J2H0 117 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 MDFIC2A0A1B0GVS7 189 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 A0A1W2PQ09 198 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 MEX3AA1L020 520 aaKnown RBP6.99□□□□□ -1.29
UBR1-204ENST00000563239 C17orf98A8MV24 154 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 SH2D1BO14796 132 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 HTR3BO95264 441 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 IGHV1-69P01742 117 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 SRMP19623 302 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 GABRR1P24046 479 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 PRTN3P24158 256 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 FPR2P25090 351 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 MAPK3P27361 379 aaPredicted RBP6.99□□□□□ -1.29
UBR1-204ENST00000563239 BMXP51813 675 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 KLRD1Q13241 179 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 IL13RA2Q14627 380 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 RSU1Q15404 277 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 GRK1Q15835 563 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 DEFB112Q30KQ8 113 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 NHLRC3Q5JS37 347 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 C1orf100Q5SVJ3 147 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 ZNF773Q6PK81 442 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 METAP1DQ6UB28 335 aaPredicted RBP6.99□□□□□ -1.29
UBR1-204ENST00000563239 FIP1L1Q6UN15 594 aaKnown RBP6.99□□□□□ -1.29
UBR1-204ENST00000563239 PDZD9Q8IXQ8 264 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 PNKDQ8N490 385 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 BPIFB2Q8N4F0 458 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 TPRX1Q8N7U7 411 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 OR5D13Q8NGL4 314 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 PHYHIPQ92561 330 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 THRSPQ92748 146 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
UBR1-204ENST00000563239 COQ2Q96H96 371 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms