RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ENTPD6O75354 484 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 OR2T7P0C7T2 308 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 UBCP0CG48 685 aaKnown RBP10.38□□□□□ -0.75
SF3B3-202ENST00000562722 ZNF20P17024 532 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 CDK2P24941 298 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 EPHA2P29317 976 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 OR3A1P47881 315 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 NPBWR2P48146 333 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 SCN1BQ07699 218 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 RBM39Q14498 530 aaKnown RBP10.38□□□□□ -0.75
SF3B3-202ENST00000562722 KPNB1Q14974 876 aaKnown RBP10.38□□□□□ -0.75
SF3B3-202ENST00000562722 SPIN3Q5JUX0 258 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 C12orf73Q69YU5 71 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 BAIAP2L2Q6UXY1 529 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 RTN4RL2Q86UN3 420 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 NEK6Q9HC98 313 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 EXOSC4Q9NPD3 245 aaKnown RBP10.38□□□□□ -0.75
SF3B3-202ENST00000562722 ING3Q9NXR8 418 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 GNG8Q9UK08 70 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 POMPQ9Y244 141 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 GSTK1Q9Y2Q3 226 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 PCDHGB5Q9Y5G0 923 aa10.38□□□□□ -0.75
SF3B3-202ENST00000562722 SH2D1BO14796 132 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 SULT1C4O75897 302 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 OR2F2O95006 317 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 DUS4LO95620 317 aaKnown RBP10.37□□□□□ -0.75
SF3B3-202ENST00000562722 PRKACBP22694 351 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 ERP29P30040 261 aaKnown RBP10.37□□□□□ -0.75
SF3B3-202ENST00000562722 HTR1FP30939 366 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 CEACAM3P40198 252 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 CDC42P60953 191 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 BDH1Q02338 343 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 ZNF146Q15072 292 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 TP53I3Q53FA7 332 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 TCTEX1D4Q5JR98 221 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 RDH10Q8IZV5 341 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 PRSS35Q8N3Z0 413 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 DNAAF1Q8NEP3 725 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 DPF1Q92782 380 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 UTP4Q969X6 686 aaKnown RBP10.37□□□□□ -0.75
SF3B3-202ENST00000562722 RFT1Q96AA3 541 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 C10orf35Q96D05 121 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 SEBOXQ9HB31 216 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-202ENST00000562722 ENOPH1Q9UHY7 261 aa10.37□□□□□ -0.75
SF3B3-202ENST00000562722 KMT2CQ8NEZ4 4911 aaKnown RBP10.37□□□□□ -0.75
SF3B3-202ENST00000562722 OR2H2O95918 312 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 ZNF44P15621 663 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 ATF1P18846 271 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 HOXD3P31249 432 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-202ENST00000562722 MNDAP41218 407 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 PTGFRP43088 359 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 OR3A4PP47883 348 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 EFNB1P98172 346 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 AESQ08117 197 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 C11orf87Q6NUJ2 197 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 C10orf99Q6UWK7 81 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 LHFPL2Q6ZUX7 228 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 ZDHHC13Q8IUH4 622 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 OR4D6Q8NGJ1 314 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 CREB3L1Q96BA8 519 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 FGGYQ96C11 551 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 ADAT3Q96EY9 351 aaPredicted RBP10.36□□□□□ -0.75
SF3B3-202ENST00000562722 RBM14Q96PK6 669 aaKnown RBP10.36□□□□□ -0.75
SF3B3-202ENST00000562722 ZNF649Q9BS31 505 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 ZNF286AQ9HBT8 521 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 HMG20AQ9NP66 347 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 INPP5EQ9NRR6 644 aa10.36□□□□□ -0.75
SF3B3-202ENST00000562722 IGKV1-9A0A0C4DH69 117 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 WI2-2373I1.2A0A1W2PRP0 233 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 E9PQ18 207 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 M0QZK8 103 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 NFYBP25208 207 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 KIR3DL2P43630 455 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 GLIPR1P48060 266 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 PRRX1P54821 245 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 CD69Q07108 199 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 PDZK1IP1Q13113 114 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 ATP6AP1Q15904 470 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 KRBOX4Q5JUW0 171 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 TPTE2P1Q5T6R2 138 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 TMEM244Q5VVB8 128 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 KDM4DQ6B0I6 523 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 CCDC144NLQ6NUI1 221 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 HEPN1Q6WQI6 88 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 OR5D18Q8NGL1 313 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 OPALINQ96PE5 141 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 GPR61Q9BZJ8 451 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 RIBC2Q9H4K1 309 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 TAS2R3Q9NYW6 316 aa10.35□□□□□ -0.75
SF3B3-202ENST00000562722 ODAMA1E959 279 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 PSMB11A5LHX3 300 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 BUB1B-PAK6H3BSN5 160 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 FAM106CPP0CH98 169 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 GDNFP39905 211 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 BNIP1Q12981 228 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 ATXN7L3Q14CW9 347 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-202ENST00000562722 HLA-DRB5Q30154 266 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 UTS2BQ765I0 119 aa10.34□□□□□ -0.75
SF3B3-202ENST00000562722 OSR2Q8N2R0 312 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms