RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 TMEM215Q68D42 235 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 ZNF567Q8N184 647 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 CENPNQ96H22 339 aaPredicted RBP1.61□□□□□ -2.15
USP8-218ENST00000561330 ANAPC13Q9BS18 74 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 LRRC19Q9H756 370 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 IFNKQ9P0W0 207 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 C14orf166Q9Y224 244 aaKnown RBP1.61□□□□□ -2.15
USP8-218ENST00000561330 KPTNQ9Y664 436 aa1.61□□□□□ -2.15
USP8-218ENST00000561330 VWA8A3KMH1 1905 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 NOS1P29475 1434 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 LOC100653049A0A140TA62 436 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 ANKRD20A5PA0PJZ0 165 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 CASC3O15234 703 aaKnown RBP1.6□□□□□ -2.15
USP8-218ENST00000561330 KRT34O76011 436 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 PDYNP01213 254 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 SOD3P08294 240 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 P0DMU3 169 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 FAM231AP0DMU4 169 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 FAM231CP0DMU5 169 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 IL12BP29460 328 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 P2RY2P41231 377 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 ZNF83P51522 516 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 BNIP2Q12982 314 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 Q499Y3 187 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 CA13Q8N1Q1 262 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 OR6K3Q8NGY3 331 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 AGR3Q8TD06 166 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 CHRNA10Q9GZZ6 450 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 PLEKHA1Q9HB21 404 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 OR5V1Q9UGF6 321 aa1.6□□□□□ -2.15
USP8-218ENST00000561330 VWDEQ8N2E2 1590 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 NEURL4Q96JN8 1562 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 A0A0J9YYE9 177 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 ZNF593O00488 134 aaPredicted RBP1.59□□□□□ -2.15
USP8-218ENST00000561330 HMMRO75330 724 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 CRTAPO75718 401 aaPredicted RBP1.59□□□□□ -2.15
USP8-218ENST00000561330 TRBC1P01850 177 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 HTR2CP28335 458 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 PEX19P40855 299 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 GPR4P46093 362 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 PYCR3Q53H96 274 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 GALNT10Q86SR1 603 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 CYP4Z1Q86W10 505 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 LMX1AQ8TE12 382 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 TWIST2Q8WVJ9 160 aa1.59□□□□□ -2.15
USP8-218ENST00000561330 TRAV8-7A0A075B6U6 113 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 H0YIV9 168 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 GPR75O95800 540 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 LIPCP11150 499 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 PRTN3P24158 256 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 CNTFRP26992 372 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 ARR3P36575 388 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 DYNC1I2Q13409 638 aaKnown RBP1.58□□□□□ -2.16
USP8-218ENST00000561330 NDUFAF6Q330K2 333 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 GLYATQ6IB77 296 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 NOXRED1Q6NXP6 359 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 ERICH5Q6P6B1 374 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 LINC00523Q86TU6 105 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 ARHGAP18Q8N392 663 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 OR2M3Q8NG83 312 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 OR2V1Q8NHB1 315 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 ZNF707Q96C28 371 aaPredicted RBP1.58□□□□□ -2.16
USP8-218ENST00000561330 ZNF436Q9C0F3 470 aaPredicted RBP1.58□□□□□ -2.16
USP8-218ENST00000561330 RBM12B-AS1Q9P1G2 102 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 SLC22A14Q9Y267 594 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 LTBP2Q14767 1821 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 TTC41PQ6P2S7 1318 aa1.58□□□□□ -2.16
USP8-218ENST00000561330 AQRO60306 1485 aaKnown RBP eCLIP1.57□□□□□ -2.163e-6■■■□□ 14.6
USP8-218ENST00000561330 COL11A1P12107 1806 aaPredicted RBP1.57□□□□□ -2.16
USP8-218ENST00000561330 TRBV24-1A0A075B6N3 115 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 POP7O75817 140 aaKnown RBP1.57□□□□□ -2.16
USP8-218ENST00000561330 TPM2P07951 284 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 CECR9P0C854 216 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 SRMP19623 302 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 PSG4Q00888 419 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 DOC2AQ14183 400 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 CASP8Q14790 479 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 TAL2Q16559 108 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 KRTAP21-3Q3LHN1 58 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 MAL2Q969L2 176 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 KRTAP4-1Q9BYQ7 146 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 ULBP1Q9BZM6 244 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 OR2D2Q9H210 308 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 ZNF286AQ9HBT8 521 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 CYB5R1Q9UHQ9 305 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 PSME2Q9UL46 239 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 PLXNB3Q9ULL4 1909 aa1.57□□□□□ -2.16
USP8-218ENST00000561330 PRB1P04280 392 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 GABRA1P14867 456 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 ELK4P28324 431 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 XKP51811 444 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 GAPTQ8N292 157 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 ATPAF2Q8N5M1 289 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 OR51L1Q8NGJ5 315 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 OR51Q1Q8NH59 317 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 FAM131CQ96AQ9 280 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 FMC1Q96HJ9 113 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 OLFM3Q96PB7 478 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 PRORYQ9H606 182 aa1.56□□□□□ -2.16
USP8-218ENST00000561330 DNAJC27Q9NZQ0 273 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms