RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MPV17LQ2QL34 196 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 LBHQ53QV2 105 aaPredicted RBP14.34□□□□□ -0.11
TPM1-228ENST00000560975 TCEAL6Q6IPX3 200 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 TMEM252Q8N6L7 170 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 OR4X1Q8NH49 305 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 DDIT4LQ96D03 193 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 ZNF160Q9HCG1 818 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 A0A1W2PNR3 127 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 PAX1P15863 534 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 WDR25Q64LD2 544 aaPredicted RBP14.34□□□□□ -0.11
TPM1-228ENST00000560975 LANCL3Q6ZV70 420 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 NOXO1Q8NFA2 376 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 Q96M66 194 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 GAB2Q9UQC2 676 aa14.34□□□□□ -0.11
TPM1-228ENST00000560975 MYO9BQ13459 2157 aa14.33□□□□□ -0.11
TPM1-228ENST00000560975 IGHG1P01857 330 aa14.33□□□□□ -0.11
TPM1-228ENST00000560975 ARL6IP1Q15041 203 aa14.33□□□□□ -0.11
TPM1-228ENST00000560975 CLEC12BQ2HXU8 276 aa14.33□□□□□ -0.11
TPM1-228ENST00000560975 LRTM2Q8N967 370 aa14.33□□□□□ -0.11
TPM1-228ENST00000560975 NECAP1Q8NC96 275 aa14.33□□□□□ -0.11
TPM1-228ENST00000560975 CERS4Q9HA82 394 aa14.33□□□□□ -0.11
TPM1-228ENST00000560975 PCDH15Q96QU1 1955 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 PGA3P0DJD8 388 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 COX5BP10606 129 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 ALDH3B1P43353 468 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 MTCP1P56278 107 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 YPEL5P62699 121 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 ZNF154Q13106 437 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 MYBPHQ13203 477 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 TMEM183AQ8IXX5 376 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 THOC3Q96J01 351 aaKnown RBP14.33□□□□□ -0.12
TPM1-228ENST00000560975 GABRG3Q99928 467 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 SYT3Q9BQG1 590 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 PLEKHF2Q9H8W4 249 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 OBP2AQ9NY56 170 aa14.33□□□□□ -0.12
TPM1-228ENST00000560975 IGKV3D-11A0A0A0MRZ8 115 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 CCDC85CA6NKD9 419 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 VSTM2BA6NLU5 285 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 EFNA2O43921 213 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 CD55P08174 381 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 PNLIPP16233 465 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 C1orf189Q5VU69 101 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 RTL6Q6ICC9 239 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 CAPNS2Q96L46 248 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 LRFN1Q9P244 771 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 KLHL13Q9P2N7 655 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 MMACHCQ9Y4U1 282 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 ZNF814B7Z6K7 855 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 DVL1O14640 695 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 GNRH1P01148 92 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 NR2C1P13056 603 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 ZNF133P52736 654 aaPredicted RBP14.32□□□□□ -0.12
TPM1-228ENST00000560975 FGF8P55075 233 aaPredicted RBP14.32□□□□□ -0.12
TPM1-228ENST00000560975 COL10A1Q03692 680 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 TLE4Q04727 773 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 C21orf62-AS1Q17RA5 79 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 COL13A1Q5TAT6 717 aaPredicted RBP14.32□□□□□ -0.12
TPM1-228ENST00000560975 FAM90A2PQ658T7 463 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 SLC16A14Q7RTX9 510 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 A0A1B0GU03 582 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 LOC102723971A0A1B0GUV8 181 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 IL18BPO95998 194 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 TNFRSF4P43489 277 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 TLE1Q04724 770 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 LCN15Q6UWW0 184 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 BATF2Q8N1L9 274 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 D2HGDHQ8N465 521 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 OR8G5Q8NG78 346 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 OR1N1Q8NGS0 311 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 NOL4LQ96MY1 436 aaPredicted RBP14.32□□□□□ -0.12
TPM1-228ENST00000560975 IGFLR1Q9H665 355 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 ZNF665Q9H7R5 613 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 ALKBH4Q9NXW9 302 aa14.32□□□□□ -0.12
TPM1-228ENST00000560975 ANKUB1A6NFN9 424 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 HLA-HP01893 362 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 MMP7P09237 267 aaPredicted RBP14.31□□□□□ -0.12
TPM1-228ENST00000560975 AADACP22760 399 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 HERV-K104P61576 105 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 RBMXL1Q96E39 390 aaKnown RBP14.31□□□□□ -0.12
TPM1-228ENST00000560975 RCC1LQ96I51 464 aaKnown RBP14.31□□□□□ -0.12
TPM1-228ENST00000560975 IL23AQ9NPF7 189 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 UBE2J1Q9Y385 318 aaPredicted RBP14.31□□□□□ -0.12
TPM1-228ENST00000560975 THADAQ6YHU6 1953 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 H3BP45 60 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 ADAM20O43506 726 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 CA11O75493 328 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 DHRS3O75911 302 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 TMEM50AO95807 157 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 CYB5R3P00387 301 aaPredicted RBP14.31□□□□□ -0.12
TPM1-228ENST00000560975 CAPZBP47756 277 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 H3F3AP84243 136 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 TNFRSF9Q07011 255 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 SLC10A1Q14973 349 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 P2RY6Q15077 328 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 SLC25A24Q6NUK1 477 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 THNSL2Q86YJ6 484 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 OR1P1Q8NH06 330 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 ST8SIA1Q92185 356 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 DKKL1Q9UK85 242 aa14.31□□□□□ -0.12
TPM1-228ENST00000560975 TCFL5Q9UL49 500 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms