RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 FAHD2BQ6P2I3 314 aaPredicted RBP10.76□□□□□ -0.69
USP3-213ENST00000559711 Q6P435 159 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 TMEM108Q6UXF1 575 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 Q6ZS49 121 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 LRP11Q86VZ4 500 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 POC1AQ8NBT0 407 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 NUP37Q8NFH4 326 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 OR52B4Q8NGK2 314 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 ZNF431Q8TF32 576 aaPredicted RBP10.76□□□□□ -0.69
USP3-213ENST00000559711 CAPSLQ8WWF8 208 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 FAM122AQ96E09 287 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 FAHD2AQ96GK7 314 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 FN3KRPQ9HA64 309 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 HES4Q9HCC6 221 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 MSL2Q9HCI7 577 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 EHFQ9NZC4 300 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 OSGIN2Q9Y236 505 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 NPTNQ9Y639 398 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 TRAV24A0A0B4J272 114 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 MED19A0JLT2 244 aaPredicted RBP10.76□□□□□ -0.69
USP3-213ENST00000559711 MCRIP1C9JLW8 97 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 SDCBPO00560 298 aaPredicted RBP10.76□□□□□ -0.69
USP3-213ENST00000559711 PTBP3O95758 552 aaKnown RBP10.76□□□□□ -0.69
USP3-213ENST00000559711 NAPSAO96009 420 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 C1QBP02746 253 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 ANXA3P12429 323 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 DUSP1P28562 367 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 KLF3P57682 345 aaPredicted RBP10.76□□□□□ -0.69
USP3-213ENST00000559711 ZNF146Q15072 292 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 C4orf46Q504U0 113 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 AADACL3Q5VUY0 350 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 Q6ZPA2 131 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 TMED4Q7Z7H5 227 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 NOXA1Q86UR1 476 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 MUC20Q8N307 709 aaPredicted RBP10.76□□□□□ -0.69
USP3-213ENST00000559711 SCGB3A2Q96PL1 93 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 DUSP13Q9UII6 198 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 GPR132Q9UNW8 380 aa10.76□□□□□ -0.69
USP3-213ENST00000559711 FAM221AA4D161 298 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 DPRXA6NFQ7 191 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 CD200P41217 278 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 GZMKP49863 264 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 ASCL1P50553 236 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 NKX2-5P52952 324 aaPredicted RBP10.75□□□□□ -0.69
USP3-213ENST00000559711 ARPC4P59998 168 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 FBXL19-AS1Q494R0 122 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 ZNF660Q6AZW8 331 aaPredicted RBP10.75□□□□□ -0.69
USP3-213ENST00000559711 DHRS11Q6UWP2 260 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 PEG10Q86TG7 708 aaKnown RBP10.75□□□□□ -0.69
USP3-213ENST00000559711 SUMF2Q8NBJ7 301 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 MARCH1Q8TCQ1 289 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 RIMS4Q9H426 269 aaPredicted RBP10.75□□□□□ -0.69
USP3-213ENST00000559711 ZNF286AQ9HBT8 521 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 ZNF222Q9UK12 451 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 ITPR1Q14643 2758 aa10.75□□□□□ -0.69
USP3-213ENST00000559711 ATRXP46100 2492 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 TRBV6-6A0A0A6YYG2 114 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 DEGS1O15121 323 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 NXPH2O95156 264 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 OR5H8P0DN80 308 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 ZBTB25P24278 435 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 FPR2P25090 351 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 LY6DQ14210 128 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 RBM39Q14498 530 aaKnown RBP10.74□□□□□ -0.69
USP3-213ENST00000559711 SURF2Q15527 256 aaPredicted RBP10.74□□□□□ -0.69
USP3-213ENST00000559711 KCNJ8Q15842 424 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 SPIN3Q5JUX0 258 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 WDR82Q6UXN9 313 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 C17orf107Q6ZR85 190 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 WFDC8Q8IUA0 241 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 TMEM185AQ8NFB2 350 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 ZNF436Q9C0F3 470 aaPredicted RBP10.74□□□□□ -0.69
USP3-213ENST00000559711 DECR2Q9NUI1 292 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 NECAP2Q9NVZ3 263 aa10.74□□□□□ -0.69
USP3-213ENST00000559711 IGHV3-64DA0A0J9YX35 117 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 OR5H14A6NHG9 310 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 ZSCAN5BA6NJL1 495 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 POM121CA8CG34 1229 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 C3orf80F5H4A9 247 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 ERVH48-1M5A8F1 160 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 CCL21O00585 134 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 FABP7O15540 132 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 OR2A4O95047 310 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 CHRNB4P30926 498 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 PLA2G5P39877 138 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 ECI1P42126 302 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 NPY4RP50391 375 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 TAS2R31P59538 309 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 SELENOVP59797 346 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 UBE2MP61081 183 aaKnown RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 DHODHQ02127 395 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 DHRS2Q13268 280 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 MPPED2Q15777 294 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 PCSK4Q6UW60 755 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 OR2AK2Q8NG84 335 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 OR2Z1Q8NG97 314 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 WFIKKN1Q96NZ8 548 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 OR2A7Q96R45 310 aa10.73□□□□□ -0.69
USP3-213ENST00000559711 DPCDQ9BVM2 203 aaPredicted RBP10.73□□□□□ -0.69
USP3-213ENST00000559711 C5orf66Q9H5L9 145 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms