RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SPERTQ8NA61 448 aa13.96□□□□□ -0.17
TPM1-219ENST00000559397 OR4D10Q8NGI6 311 aa13.96□□□□□ -0.17
TPM1-219ENST00000559397 CYYR1Q96J86 154 aa13.96□□□□□ -0.17
TPM1-219ENST00000559397 NUDT15Q9NV35 164 aa13.96□□□□□ -0.17
TPM1-219ENST00000559397 UNC79Q9P2D8 2635 aa13.96□□□□□ -0.18
TPM1-219ENST00000559397 LRP5LA4QPB2 252 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A10PA6NDY2 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A18PA6NE21 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A16PA6NEW6 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A20PA6NIJ5 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A8PA6NJQ4 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A7PA6NKC0 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A22PA8MWA6 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A12PA8MX19 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A5PA8MXJ8 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A23PA8MXZ1 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 ZNF736B4DX44 427 aaPredicted RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 J3QT63 122 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 PTBP3O95758 552 aaKnown RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A15PP0C7V4 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A13PP0C7W8 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A14PP0C7W9 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FAM90A24PP0C7X0 464 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 BCL3P20749 454 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 CBX5P45973 191 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 FGF12P61328 243 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 HAGHLQ6PII5 290 aaPredicted RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 ZNF554Q86TJ5 538 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 GVQW1Q8N7I0 195 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 OR8S1Q8NH09 359 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 OR56B4Q8NH76 319 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 SLAMF9Q96A28 289 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 OR2V2Q96R30 315 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 VRK1Q99986 396 aaPredicted RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 CXXC4Q9H2H0 198 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 MCUBQ9NWR8 336 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 IL19Q9UHD0 177 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 ST3GAL6Q9Y274 331 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 CSMD1Q96PZ7 3565 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 CHD3Q12873 2000 aaKnown RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 BAHCC1Q9P281 2608 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 ABCA12Q86UK0 2595 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 TMEM210A6NLX4 147 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 F8VVB4 439 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 F8VWA3 439 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 GEMIN2O14893 280 aaKnown RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 SYNGR1O43759 233 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 RAB3DO95716 219 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 H2AFB2P0C5Z0 115 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 TBPP20226 339 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 TNFSF4P23510 183 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 HLA-DMAP28067 261 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 TNFAIP6P98066 277 aaPredicted RBP13.95□□□□□ -0.18
TPM1-219ENST00000559397 CARTPTQ16568 116 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 C6orf201Q7Z4U5 140 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 MEGF10Q96KG7 1140 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 RAB1BQ9H0U4 201 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 RHOFQ9HBH0 211 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 ALG5Q9Y673 324 aa13.95□□□□□ -0.18
TPM1-219ENST00000559397 SPG11Q96JI7 2443 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 TRAV6A0A075B6T7 132 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 TRAPPC2LH3BP13 241 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 NDUFB6O95139 128 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 DHFRP00374 187 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 FCER2P06734 321 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 ZNF735P0CB33 412 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 TRAPPC2P0DI81 140 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 TRAPPC2BP0DI82 140 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 PMELP40967 661 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 CCL8P80075 99 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 ARFRP1Q13795 201 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 OR4S1Q8NGB4 309 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 ITLN1Q8WWA0 313 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 TINAGL1Q9GZM7 467 aaPredicted RBP13.94□□□□□ -0.18
TPM1-219ENST00000559397 C20orf85Q9H1P6 137 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 IFT46Q9NQC8 304 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 PLEKHJ1Q9NW61 149 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 ZNF581Q9P0T4 197 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 PLEKHA6Q9Y2H5 1048 aa13.94□□□□□ -0.18
TPM1-219ENST00000559397 AKAP9Q99996 3911 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 C7orf66A4D0T2 115 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 PDCD6O75340 191 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 HPXP02790 462 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 ACAA1P09110 424 aaPredicted RBP13.93□□□□□ -0.18
TPM1-219ENST00000559397 GATA4P43694 442 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 MZT1Q08AG7 82 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 MEF2DQ14814 521 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 TESK1Q15569 626 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 ZNF782Q6ZMW2 699 aaPredicted RBP13.93□□□□□ -0.18
TPM1-219ENST00000559397 SNAPC3Q92966 411 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 EMG1Q92979 244 aaKnown RBP13.93□□□□□ -0.18
TPM1-219ENST00000559397 ZNF701Q9NV72 531 aaPredicted RBP13.93□□□□□ -0.18
TPM1-219ENST00000559397 USF3Q68DE3 2245 aa13.93□□□□□ -0.18
TPM1-219ENST00000559397 HMX3A6NHT5 357 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 PAX1P15863 534 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 MECP2P51608 486 aaKnown RBP13.92□□□□□ -0.18
TPM1-219ENST00000559397 RAB25P57735 213 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 ZNF154Q13106 437 aa13.92□□□□□ -0.18
TPM1-219ENST00000559397 MPPED2Q15777 294 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms