RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 SMPD3Q9NY59 655 aaPredicted RBP8.22□□□□□ -1.09
USP3-207ENST00000558218 MYRFQ9Y2G1 1151 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 LINC00312Q9Y6C7 94 aa8.22□□□□□ -1.09
USP3-207ENST00000558218 A0A1W2PRD5 423 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 A0A1W2PRF3 423 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 A0A1W2PRM7 423 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 TMEM82A0PJX8 343 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 H3BUI4 141 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 M0QZ24 198 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 ZFPL1O95159 310 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 CCL3L1P16619 93 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 CEBPDP49716 269 aaPredicted RBP8.21□□□□□ -1.1
USP3-207ENST00000558218 DYNLT3P51808 116 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 DLX1P56177 255 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 EDDM3BP56851 147 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 ZNF273Q14593 569 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 ZSCAN26Q16670 478 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 TTC23Q5W5X9 447 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 OR52W1Q6IF63 320 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 PNKDQ8N490 385 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 PACRGLQ8N7B6 248 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 CHST4Q8NCG5 386 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 OR5AK2Q8NH90 309 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 TAF15Q92804 592 aaKnown RBP eCLIP8.21□□□□□ -1.1
USP3-207ENST00000558218 CORO2AQ92828 525 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 STMN2Q93045 179 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 FOXRED1Q96CU9 486 aaPredicted RBP8.21□□□□□ -1.1
USP3-207ENST00000558218 ZNF714Q96N38 554 aa8.21□□□□□ -1.1
USP3-207ENST00000558218 UBE2J1Q9Y385 318 aaPredicted RBP8.21□□□□□ -1.1
USP3-207ENST00000558218 H3BSH0 61 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 H3BUX3 64 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 BAG2O95816 211 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 CSN2P05814 226 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 IGHV1-8P0DP01 117 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 BCL3P20749 454 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 GABRR1P24046 479 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 NPBWR2P48146 333 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 IL18R1Q13478 541 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 GRK1Q15835 563 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 MINOS1Q5TGZ0 78 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 ZNF626Q68DY1 528 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 ELP2Q6IA86 826 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 SLC35E4Q6ICL7 350 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 CDPF1Q6NVV7 123 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 RPL22L1Q6P5R6 122 aaKnown RBP8.2□□□□□ -1.1
USP3-207ENST00000558218 CRIP3Q6Q6R5 217 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 TMPRSS11AQ6ZMR5 421 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 PXT1Q8NFP0 134 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 OR52N4Q8NGI2 321 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 OR51A4Q8NGJ6 313 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 OR52I1Q8NGK6 324 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 FBLIM1Q8WUP2 373 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 PPA2Q9H2U2 334 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 NCOR1P1Q9H4R4 102 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 ISG20L2Q9H9L3 353 aaKnown RBP8.2□□□□□ -1.1
USP3-207ENST00000558218 AMBNQ9NP70 447 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 RBFOX1Q9NWB1 397 aaKnown RBP8.2□□□□□ -1.1
USP3-207ENST00000558218 TAS2R3Q9NYW6 316 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 AASSQ9UDR5 926 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 PITPNC1Q9UKF7 332 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 DHDHQ9UQ10 334 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 MINOS1-NBL1R4GNA1 71 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 HSPE1-MOB4S4R3N1 261 aa8.2□□□□□ -1.1
USP3-207ENST00000558218 TMEM238LA0A1B0GVL6 79 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 MEGF11A6BM72 1044 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.19□□□□□ -1.1
USP3-207ENST00000558218 ODF3BA8MYP8 253 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 MAGEB3O15480 346 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 SULT1B1O43704 296 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 PSPNO60542 156 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 WBP4O75554 376 aaKnown RBP8.19□□□□□ -1.1
USP3-207ENST00000558218 ALDOBP05062 364 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 ARG1P05089 322 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 CD2P06729 351 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 LIMS3P0CW19 117 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 LIMS4P0CW20 117 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 PRKACAP17612 351 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 GABRA5P31644 462 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 MTNR1BP49286 362 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 POU3F4P49335 361 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 P2RX3P56373 397 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 PRB3Q04118 309 aaPredicted RBP8.19□□□□□ -1.1
USP3-207ENST00000558218 MED21Q13503 144 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 KISS1Q15726 138 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 ZNF529Q6P280 563 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 RTN4RL2Q86UN3 420 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 BATF2Q8N1L9 274 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 SETD9Q8NE22 299 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 Q8NFD4 153 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 OR4S1Q8NGB4 309 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 OR4C13Q8NGP0 309 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 OR13C9Q8NGT0 318 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 OR10AC1Q8NH08 325 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 PIFOQ8TCI5 191 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 GPR148Q8TDV2 347 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 C17orf50Q8WW18 174 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 APH1BQ8WW43 257 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 CREB3L1Q96BA8 519 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 NPFFR1Q9GZQ6 430 aa8.19□□□□□ -1.1
USP3-207ENST00000558218 MMP27Q9H306 513 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms