RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 IGHG4P01861 327 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 FBP1P09467 338 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 OR10J4P0C629 311 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 COX4I1P13073 169 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 IGFBP3P17936 291 aaPredicted RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 TBPP20226 339 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CXCR1P25024 350 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 FMO3P31513 532 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CCR7P32248 378 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 PYCR1P32322 319 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 IFNGR2P38484 337 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 VHLP40337 213 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 GCLMP48507 274 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ZNF136P52737 540 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 RAB2AP61019 212 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 NUTF2P61970 127 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 RPS14P62263 151 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 BTN3A2P78410 334 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ELF3P78545 371 aaPredicted RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 SLC39A6Q13433 755 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 PPP1R1AQ13522 171 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 OR5I1Q13606 314 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ZNF235Q14590 738 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 TRAM1Q15629 374 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 C4orf26Q17RF5 130 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 SYT6Q5T7P8 510 aaPredicted RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 CPTPQ5TA50 214 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 CST9Q5W186 159 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 C12orf54Q6X4T0 127 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 SLC36A1Q7Z2H8 476 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 MRPL52Q86TS9 123 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 NIT1Q86X76 327 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 C10orf107Q8IVU9 208 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 RDH10Q8IZV5 341 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 TMEM61Q8N0U2 210 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 VKORC1L1Q8N0U8 176 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ST6GALNAC3Q8NDV1 305 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 OR2Z1Q8NG97 314 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 OR4F15Q8NGB8 312 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 HAVCR2Q8TDQ0 301 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ABHD3Q8WU67 409 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 TNFAIP8L1Q8WVP5 186 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 C11orf40Q8WZ69 217 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 UFD1Q92890 307 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 C12orf43Q96C57 262 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 HAUS1Q96CS2 278 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ZHX1-C8orf76Q96EF9 292 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 MED8Q96G25 268 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 OXGR1Q96P68 337 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 MS4A4EQ96PG1 132 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 VAT1Q99536 393 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 SIGMAR1Q99720 223 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 RSPO3Q9BXY4 272 aaPredicted RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 ARV1Q9H2C2 271 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 BOLA2Q9H3K6 86 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 METTL17Q9H7H0 456 aaPredicted RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 WFDC1Q9HC57 220 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 ACOT13Q9NPJ3 140 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 RGS18Q9NS28 235 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 FAM206AQ9NX38 181 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 TAS2R13Q9NYV9 303 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 SS18L2Q9UHA2 77 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 GNPTGQ9UJJ9 305 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 COPS3Q9UNS2 423 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 SLC7A11Q9UPY5 501 aa1.93□□□□□ -2.1
SPG11-206ENST00000558093 UTP11Q9Y3A2 253 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 CHD2O14647 1828 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 NUP153P49790 1475 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 PHF3Q92576 2039 aaKnown RBP1.93□□□□□ -2.1
SPG11-206ENST00000558093 DENND4AQ7Z401 1863 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 PPIP5K1Q6PFW1 1433 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ERBINQ96RT1 1412 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 WNK3Q9BYP7 1800 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 MYH7P12883 1935 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 PQLC2LA1A4F0 135 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OR5B21A6NL26 309 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TRDCB7Z8K6 153 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ANKRD65E5RJM6 399 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 PPP5D1E7EU14 171 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 KRTAP4-16G5E9R7 235 aaPredicted RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 H7C2Y5 167 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 GPR31O00270 319 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TXNDC9O14530 226 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 DLEU1O43261 78 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ERI3O43414 337 aaKnown RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 CXCL13O43927 109 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 CNMDO75829 334 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OR2J2O76002 312 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 GPR75O95800 540 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 LGALS2P05162 132 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TACSTD2P09758 323 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 IFI30P13284 250 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 GABRG2P18507 467 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 NELFEP18615 380 aaKnown RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 ALOX5APP20292 161 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OGNP20774 298 aaKnown RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 OMGP23515 440 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 F8A1P23610 371 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 F2RP25116 425 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms