RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 OR5M9Q8NGP3 310 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 OR4K15Q8NH41 348 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 OR2AE1Q8NHA4 323 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 SPATA3Q8NHX4 192 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 ASB13Q8WXK3 278 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 PIGCQ92535 297 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 WBP1Q96G27 269 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 RNF170Q96K19 258 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 RITA1Q96K30 269 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 HYLS1Q96M11 299 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 C1orf147Q96MC9 270 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 SCGB3A2Q96PL1 93 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 SPACA5Q96QH8 159 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TAAR6Q96RI8 345 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 GINS4Q9BRT9 223 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TM2D1Q9BX74 207 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 C20orf85Q9H1P6 137 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 BANF2Q9H503 90 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 RANBP3Q9H6Z4 567 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 ZMAT3Q9HA38 289 aaKnown RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 RANGRFQ9HD47 186 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 MYOZ1Q9NP98 299 aaPredicted RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 OBP2BQ9NPH6 170 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 IFT46Q9NQC8 304 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.81□□□□□ -1.8
SRP54-212ENST00000556992 GPR173Q9NS66 373 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 PTTG3PQ9NZH4 202 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 IL36GQ9NZH8 169 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 KCNN3Q9UGI6 736 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 ITGB1BP2Q9UKP3 347 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 PAIP2BQ9ULR5 123 aaKnown RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 HSF4Q9ULV5 492 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 KCNK7Q9Y2U2 307 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 STARD10Q9Y365 291 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 CSAG2Q9Y5P2 127 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 MPC1Q9Y5U8 109 aa3.81□□□□□ -1.8
SRP54-212ENST00000556992 TNRC6BQ9UPQ9 1833 aaKnown RBP3.81□□□□□ -1.8
SRP54-212ENST00000556992 TEP1Q99973 2627 aaKnown RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 EML5Q05BV3 1969 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 NUP210LQ5VU65 1888 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 MEIKINA0A087WXM9 373 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PQLC2LA1A4F0 135 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM172BPA6NC97 362 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A10PA6NDY2 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A18PA6NE21 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A16PA6NEW6 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 TMEM235A6NFC5 223 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A20PA6NIJ5 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A8PA6NJQ4 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A7PA6NKC0 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 CD300LBA8K4G0 201 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ZNF850A8MQ14 1090 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A22PA8MWA6 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A12PA8MX19 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A5PA8MXJ8 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A23PA8MXZ1 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PYCARD-AS1I3L0S3 204 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ARPC1BO15143 372 aaKnown RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 SOCS1O15524 211 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 SSX5O60225 188 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 CREBL2O60519 120 aaPredicted RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 WDR1O75083 606 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 C1QBP02746 253 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FCER2P06734 321 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A15PP0C7V4 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A13PP0C7W8 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A14PP0C7W9 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAM90A24PP0C7X0 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 SULT1A3P0DMM9 295 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 SULT1A4P0DMN0 295 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ANXA3P12429 323 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 GNB3P16520 340 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 MALP21145 153 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FUT3P21217 361 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 IL32P24001 234 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 RAD52P43351 418 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 OR3A3P47888 321 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 UCNP55089 124 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 TMEM50BP56557 158 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 TAS2R46P59540 309 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ZP1P60852 638 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PRDX4Q13162 271 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 TNK1Q13470 666 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ARFRP1Q13795 201 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 HABP2Q14520 560 aaPredicted RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 FCN2Q15485 313 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 GUSBP1Q15486 140 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 GRK1Q15835 563 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 LINC00303Q3SY05 128 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ACSF3Q4G176 576 aaPredicted RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 VAX1Q5SQQ9 334 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 PLCXD3Q63HM9 321 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 ELP2Q6IA86 826 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FAHD2BQ6P2I3 314 aaPredicted RBP3.8□□□□□ -1.8
SRP54-212ENST00000556992 TMEM108Q6UXF1 575 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 TFAP2EQ6VUC0 442 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 FBXW12Q6X9E4 464 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 C3P1Q6ZMU1 363 aa3.8□□□□□ -1.8
SRP54-212ENST00000556992 SLC36A1Q7Z2H8 476 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms