RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 MMP23AO75900 390 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 ZNF19P17023 458 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 ERP29P30040 261 aaKnown RBP18.18■□□□□ 0.5
ACTN1-220ENST00000556433 CCR9P51686 369 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 P2RX3P56373 397 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 BLCAPP62952 87 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 EMX1Q04741 257 aaPredicted RBP18.18■□□□□ 0.5
ACTN1-220ENST00000556433 ZBTB49Q6ZSB9 765 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 ACBD7Q8N6N7 88 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 OR10AC1Q8NH08 325 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 OR5M11Q96RB7 305 aa18.18■□□□□ 0.5
ACTN1-220ENST00000556433 EXOSC4Q9NPD3 245 aaKnown RBP18.18■□□□□ 0.5
ACTN1-220ENST00000556433 IGKV1-12A0A0C4DH73 117 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 EI24O14681 340 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 IGKV1D-12P01611 117 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 HTR1DP28221 377 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 BEAN1Q3B7T3 259 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 ARSJQ5FYB0 599 aaPredicted RBP18.17■□□□□ 0.5
ACTN1-220ENST00000556433 Q6ZS46 218 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 RNF144BQ7Z419 303 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 OR51A4Q8NGJ6 313 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 OR13C3Q8NGS6 347 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 SPACA5Q96QH8 159 aa18.17■□□□□ 0.5
ACTN1-220ENST00000556433 SNTNA6NMZ2 147 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 H3BUI4 141 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 OR2H2O95918 312 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 SCN1BQ07699 218 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 SAMD5Q5TGI4 173 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 OR5D18Q8NGL1 313 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 OR13C9Q8NGT0 318 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 PELI1Q96FA3 418 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 C4orf36Q96KX1 117 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 AASSQ9UDR5 926 aa18.16■□□□□ 0.5
ACTN1-220ENST00000556433 EXOGQ9Y2C4 368 aaKnown RBP18.16■□□□□ 0.5
ACTN1-220ENST00000556433 TRGV10A0A0A0MS01 117 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 FUOMA2VDF0 154 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 OR4C45A6NMZ5 311 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 FAM90A22PA8MWA6 464 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 KDM4BO94953 1096 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 MT-ND2P03891 347 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 AESQ08117 197 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 IL18R1Q13478 541 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 ALKBH1Q13686 389 aaKnown RBP18.15■□□□□ 0.5
ACTN1-220ENST00000556433 PRAMEF5Q5TYX0 476 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 OR52W1Q6IF63 320 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 BAIAP2L2Q6UXY1 529 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 ABHD12Q8N2K0 398 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 LGALS12Q96DT0 336 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 CITED2Q99967 270 aaPredicted RBP18.15■□□□□ 0.5
ACTN1-220ENST00000556433 WNT10AQ9GZT5 417 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 GAL3ST2Q9H3Q3 398 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 ZCCHC4Q9H5U6 513 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 NEK6Q9HC98 313 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 PCDHGB5Q9Y5G0 923 aa18.15■□□□□ 0.5
ACTN1-220ENST00000556433 PLXNB1O43157 2135 aa18.14■□□□□ 0.5
ACTN1-220ENST00000556433 NOTCH3Q9UM47 2321 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 E9PQ18 207 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 CDK2P24941 298 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 LMO1P25800 156 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 GLIPR1P48060 266 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 ALDH3A2P51648 485 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 KPNB1Q14974 876 aaKnown RBP18.14■□□□□ 0.49
ACTN1-220ENST00000556433 KPRPQ5T749 579 aaPredicted RBP18.14■□□□□ 0.49
ACTN1-220ENST00000556433 RTN4RL2Q86UN3 420 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 LHFPL3Q86UP9 236 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 NDUFA11Q86Y39 141 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 OR4P4Q8NGL7 312 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 WIPF2Q8TF74 440 aaPredicted RBP18.14■□□□□ 0.49
ACTN1-220ENST00000556433 CORO2AQ92828 525 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 MRPL48Q96GC5 212 aaKnown RBP18.14■□□□□ 0.49
ACTN1-220ENST00000556433 COMMD4Q9H0A8 199 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 MMP28Q9H239 520 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 DPM3Q9P2X0 92 aa18.14■□□□□ 0.49
ACTN1-220ENST00000556433 H3BNX3 289 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 ZNF44P15621 663 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 VDAC2P45880 294 aaPredicted RBP18.13■□□□□ 0.49
ACTN1-220ENST00000556433 HEPN1Q6WQI6 88 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 SAXO1Q8IYX7 474 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 CBR4Q8N4T8 237 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 STMN2Q93045 179 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 R3HDM4Q96D70 268 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 MYCBPQ99417 103 aaPredicted RBP18.13■□□□□ 0.49
ACTN1-220ENST00000556433 ALG8Q9BVK2 526 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 RHOFQ9HBH0 211 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 ING3Q9NXR8 418 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 TAS2R3Q9NYW6 316 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 GMPPBQ9Y5P6 360 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 KIAA2026Q5HYC2 2103 aa18.13■□□□□ 0.49
ACTN1-220ENST00000556433 PRB2P02812 416 aaPredicted RBP18.12■□□□□ 0.49
ACTN1-220ENST00000556433 ALDOBP05062 364 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 TMEM225BP0DP42 221 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 BDH1Q02338 343 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 GALEQ14376 348 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 TMEM95Q3KNT9 176 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 Q6P435 159 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 OR4F17Q8NGA8 305 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 ZNF596Q8TC21 504 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 OR4F4Q96R69 305 aa18.12■□□□□ 0.49
ACTN1-220ENST00000556433 ISG20L2Q9H9L3 353 aaKnown RBP18.12■□□□□ 0.49
ACTN1-220ENST00000556433 ODAMA1E959 279 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms