RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 RTL6Q6ICC9 239 aa7.75□□□□□ -1.17
SYNE2-217ENST00000555022 DNM1P34Q6PK57 102 aa7.75□□□□□ -1.17
SYNE2-217ENST00000555022 C1orf87Q8N0U7 546 aa7.75□□□□□ -1.17
SYNE2-217ENST00000555022 SLC38A9Q8NBW4 561 aa7.75□□□□□ -1.17
SYNE2-217ENST00000555022 THRSPQ92748 146 aa7.75□□□□□ -1.17
SYNE2-217ENST00000555022 CPNE4Q96A23 557 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-217ENST00000555022 FSCN3Q9NQT6 498 aa7.75□□□□□ -1.17
SYNE2-217ENST00000555022 RP1L1Q8IWN7 2480 aaPredicted RBP7.75□□□□□ -1.17
SYNE2-217ENST00000555022 LINC01565O15544 149 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 AMBPP02760 352 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 ZNF17P17021 662 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 AADACP22760 399 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 H1FNTQ75WM6 255 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 FAM185AQ8N0U4 392 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 OR14L1PQ8NHC6 308 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 LMX1AQ8TE12 382 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 OR51B6Q9H340 312 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 FUT9Q9Y231 359 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 LOC390937A0A1W2PQ73 354 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 A6NCN8 305 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 ARGFXA6NJG6 315 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 FTCDNL1E5RQL4 147 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 TRAPPC6AO75865 159 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 HNRNPA2B1P22626 353 aaKnown RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 FCARP24071 287 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 COL8A2P25067 703 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 NTSR1P30989 418 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 IL15RAQ13261 267 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 PRR31Q5SQ13 230 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 SPSB3Q6PJ21 355 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 ERASQ7Z444 233 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 FBXL14Q8N1E6 418 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 OR2C3Q8N628 320 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 GATAD1Q8WUU5 269 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 IL22RA2Q969J5 263 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 TMEM204Q9BSN7 226 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 PLK3Q9H4B4 646 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 NAA60Q9H7X0 242 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 SERINC1Q9NRX5 453 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 COPS7AQ9UBW8 275 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 ERRFI1Q9UJM3 462 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 AHCTF1Q8WYP5 2266 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 CXorf51AA0A1B0GTR3 108 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 K7N7A8 449 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 DXOO77932 396 aaKnown RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 TNFP01375 233 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 CA3P07451 260 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 CHRNA7P36544 502 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 NKX2-1P43699 371 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 SMAD4Q13485 552 aaKnown RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 LHFPL1Q86WI0 220 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 LYPD6Q86Y78 171 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 ZNF695Q8IW36 515 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 PHOSPHO2Q8TCD6 241 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 HOXB13Q92826 284 aaPredicted RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 BADQ92934 168 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 MRGPRX1Q96LB2 322 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 PCGF1Q9BSM1 259 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 NKX2-4Q9H2Z4 354 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 PLEK2Q9NYT0 353 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 ANXA10Q9UJ72 324 aa7.74□□□□□ -1.17
SYNE2-217ENST00000555022 HEATR1Q9H583 2144 aaKnown RBP7.74□□□□□ -1.17
SYNE2-217ENST00000555022 TLCD2A6NGC4 264 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 FIGNL2A6NMB9 653 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 PTBP3O95758 552 aaKnown RBP7.73□□□□□ -1.17
SYNE2-217ENST00000555022 NPSP0C0P6 89 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 GZMBP10144 247 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 EDN3P14138 238 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 FAM3BP58499 235 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-217ENST00000555022 H3F3AP84243 136 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 PMP22Q01453 160 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 TGFBR3Q03167 851 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 TMEM92Q6UXU6 159 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 OR4X1Q8NH49 305 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 HLA-CQ95604 372 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 ZNF837Q96EG3 531 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-217ENST00000555022 LYZL4Q96KX0 146 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 A0A1W2PQF6 199 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 CRYM-AS1A6NIL9 109 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 TMEM50AO95807 157 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 DDAH2O95865 285 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 SEC11BP0C7V7 166 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 HLA-DRB3P79483 266 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 SPINK9Q5DT21 86 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 GRINAQ7Z429 371 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 RBM14Q96PK6 669 aaKnown RBP7.73□□□□□ -1.17
SYNE2-217ENST00000555022 BCO1Q9HAY6 547 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 PLEKHA2Q9HB19 425 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 TRAV34A0A0B4J273 112 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 GAPDHP04406 335 aaKnown RBP7.73□□□□□ -1.17
SYNE2-217ENST00000555022 METTL15P1P0C7V9 234 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 CARD18P57730 90 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 TMEM187Q14656 261 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 SNAI3Q3KNW1 292 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 SSX7Q7RTT5 188 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 GPR137CQ8N3F9 429 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 IL1F10Q8WWZ1 152 aa7.73□□□□□ -1.17
SYNE2-217ENST00000555022 HIST1H2AAQ96QV6 131 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms