RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 CEP19Q96LK0 163 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 HES4Q9HCC6 221 aa19.41■□□□□ 0.7
TDP1-205ENST00000553527 A0A1W2PRD5 423 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 A0A1W2PRF3 423 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 A0A1W2PRM7 423 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 ARL6IP5O75915 188 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 UCHL1P09936 223 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 CALCBP10092 127 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 BPIFB3P59826 476 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 ERVK11-1P61568 191 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 SLC9A3R2Q15599 337 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 DDI2Q5TDH0 399 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 ZNF561Q8N587 486 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 OR4M1Q8NGD0 313 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 C8orf46Q8TAG6 207 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 PHYHIPQ92561 330 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 SLITRK2Q9H156 845 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 TCF7L1Q9HCS4 588 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 STUB1Q9UNE7 303 aa19.4■□□□□ 0.7
TDP1-205ENST00000553527 HOXA3O43365 443 aaPredicted RBP19.39■□□□□ 0.69
TDP1-205ENST00000553527 SPRY1O43609 319 aaPredicted RBP19.39■□□□□ 0.69
TDP1-205ENST00000553527 MAS1P04201 325 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 ALDOBP05062 364 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 CD36P16671 472 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 KISS1Q15726 138 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 CD200R1LQ6Q8B3 271 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 SATL1Q86VE3 508 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 Q8N7P7 452 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 OR52N4Q8NGI2 321 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 SLC25A28Q96A46 364 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 GPER1Q99527 375 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 C19orf12Q9NSK7 152 aa19.39■□□□□ 0.69
TDP1-205ENST00000553527 TRDV1A0A1B0GX56 115 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 CYB5AP00167 134 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 KNG1P01042 644 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 GALP22466 123 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 CALRP27797 417 aaKnown RBP19.38■□□□□ 0.69
TDP1-205ENST00000553527 SNU13P55769 128 aaKnown RBP19.38■□□□□ 0.69
TDP1-205ENST00000553527 COL10A1Q03692 680 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 KLRD1Q13241 179 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 BLMHQ13867 455 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 MKXQ8IYA7 352 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 NKAIN3Q8N8D7 197 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 ASCC1Q8N9N2 400 aaKnown RBP19.38■□□□□ 0.69
TDP1-205ENST00000553527 OR5D18Q8NGL1 313 aa19.38■□□□□ 0.69
TDP1-205ENST00000553527 EMG1Q92979 244 aaKnown RBP19.38■□□□□ 0.69
TDP1-205ENST00000553527 PPIL3Q9H2H8 161 aaKnown RBP19.38■□□□□ 0.69
TDP1-205ENST00000553527 EXOSC4Q9NPD3 245 aaKnown RBP19.38■□□□□ 0.69
TDP1-205ENST00000553527 TMEM89A2RUT3 159 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 HAX1O00165 279 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 BCL3P20749 454 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 NPBWR2P48146 333 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 RNF144BQ7Z419 303 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 KIR3DL3Q8N743 410 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 TAF15Q92804 592 aaKnown RBP eCLIP19.37■□□□□ 0.69
TDP1-205ENST00000553527 DMRTB1Q96MA1 342 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 SSR3Q9UNL2 185 aa19.37■□□□□ 0.69
TDP1-205ENST00000553527 A0A0U1RQK1 487 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 ANGPTL7O43827 346 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 TK1P04183 234 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 SRMP19623 302 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 DUSP1P28562 367 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 ZNF93P35789 620 aaPredicted RBP19.36■□□□□ 0.69
TDP1-205ENST00000553527 RPL31P62899 125 aaKnown RBP19.36■□□□□ 0.69
TDP1-205ENST00000553527 PDZK1IP1Q13113 114 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 PIP4P2Q8N4L2 257 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 JAGN1Q8N5M9 183 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 FAM192AQ9GZU8 254 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 RBFOX1Q9NWB1 397 aaKnown RBP19.36■□□□□ 0.69
TDP1-205ENST00000553527 IL36RNQ9UBH0 155 aa19.36■□□□□ 0.69
TDP1-205ENST00000553527 TRBV23-1A0A0A0MS06 115 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 MEGF11A6BM72 1044 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 RNASEK-C17orf49H0YIS7 233 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 CHRM2P08172 466 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 GADD45AP24522 165 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 MYL9P24844 172 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 TMEM200BQ69YZ2 307 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 C22orf42Q6IC83 251 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 CRIP3Q6Q6R5 217 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 Q6YL49 198 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 PNKDQ8N490 385 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 TNFAIP8L1Q8WVP5 186 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 OR51E2Q9H255 320 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 FAM96BQ9Y3D0 163 aa19.35■□□□□ 0.69
TDP1-205ENST00000553527 MEX3AA1L020 520 aaKnown RBP19.34■□□□□ 0.69
TDP1-205ENST00000553527 M0R1W7 72 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 RNASE1P07998 156 aaKnown RBP19.34■□□□□ 0.69
TDP1-205ENST00000553527 TMEM225BP0DP42 221 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 ZP1P60852 638 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 TIMM50Q3ZCQ8 353 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 LRRTM1Q86UE6 522 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 FAM58AQ8N1B3 248 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 YIPF6Q96EC8 236 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 NKX3-1Q99801 234 aaPredicted RBP19.34■□□□□ 0.69
TDP1-205ENST00000553527 CHCHD6Q9BRQ6 235 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 METTL8Q9H825 291 aaKnown RBP19.34■□□□□ 0.69
TDP1-205ENST00000553527 ZMAT3Q9HA38 289 aaKnown RBP19.34■□□□□ 0.69
TDP1-205ENST00000553527 TXNL4BQ9NX01 149 aaKnown RBP19.34■□□□□ 0.69
TDP1-205ENST00000553527 DSCAML1Q8TD84 2053 aa19.34■□□□□ 0.69
TDP1-205ENST00000553527 LOC100506127A0A0U1RQW1 187 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms