RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 OR51I2Q9H344 312 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 PCDHB16Q9NRJ7 776 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 SH3BGRL2Q9UJC5 107 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 CDIPTO14735 213 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 IGKV3-15P01624 115 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 CBR1P16152 277 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 FCGR2CP31995 323 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 NDUFA5Q16718 116 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 C12orf4Q9NQ89 552 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 MKRN2OSH3BPM6 223 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 EXOSC2Q13868 293 aaKnown RBP17.86■□□□□ 0.45
PRDM4-205ENST00000550376 ZNF474Q6S9Z5 364 aaPredicted RBP17.86■□□□□ 0.45
PRDM4-205ENST00000550376 TMEM185AQ8NFB2 350 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 ARL6Q9H0F7 186 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 OPA3Q9H6K4 179 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 CEACAM18A8MTB9 384 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 FAHD2BQ6P2I3 314 aaPredicted RBP17.86■□□□□ 0.45
PRDM4-205ENST00000550376 ZNF573Q86YE8 665 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 FAHD2AQ96GK7 314 aa17.86■□□□□ 0.45
PRDM4-205ENST00000550376 ROS1P08922 2347 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 TRAV39A0A0B4J263 110 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 MBD3L4A6NDZ8 208 aaPredicted RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 MBD3L3A6NE82 208 aaPredicted RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 MBD3L5A6NJ08 208 aaPredicted RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 SFT2D2O95562 160 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 RPS2P15880 293 aaKnown RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 DTYMKP23919 212 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 SP6Q3SY56 376 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 C20orf204Q6ZNR8 217 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 SCCPDHQ8NBX0 429 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 Q8NFD4 153 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 MBD3L2Q8NHZ7 208 aaPredicted RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 CLEC4MQ9H2X3 399 aaPredicted RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 NECAP2Q9NVZ3 263 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 DHODHQ02127 395 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 ELP2Q6IA86 826 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 TMUB2Q71RG4 321 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 BHLHA15Q7RTS1 189 aaPredicted RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 TMEM200AQ86VY9 491 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 ADAT1Q9BUB4 502 aaKnown RBP17.85■□□□□ 0.45
PRDM4-205ENST00000550376 MSL2Q9HCI7 577 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 OBP2BQ9NPH6 170 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 EDARQ9UNE0 448 aa17.85■□□□□ 0.45
PRDM4-205ENST00000550376 HOXB5P09067 269 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 SCTP09683 121 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 TAS2R31P59538 309 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 NHLH1Q02575 133 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 PHLDA2Q53GA4 152 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 ZNF826PQ6ZT77 177 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 ZNF546Q86UE3 836 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 CITED4Q96RK1 184 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 MFFQ9GZY8 342 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 NBASA2RRP1 2371 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 IGHV1-18A0A0C4DH31 117 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 ZNF83P51522 516 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 ZNF154Q13106 437 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 CCDC36Q8IYA8 594 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 FAM58AQ8N1B3 248 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 SUMF2Q8NBJ7 301 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 OR5T2Q8NGG2 359 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 GPHA2Q96T91 129 aa17.84■□□□□ 0.45
PRDM4-205ENST00000550376 ATRXP46100 2492 aa17.83■□□□□ 0.45
PRDM4-205ENST00000550376 OR5B21A6NL26 309 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 RFPL4AA6NLU0 287 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 DBX1A6NMT0 343 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 RFPL4AL1F8VTS6 287 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 BET1O15155 118 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 CNOT4O95628 575 aaKnown RBP17.83■□□□□ 0.44
PRDM4-205ENST00000550376 TFF1P04155 84 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 C22orf34Q6ZV56 151 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 ZNF767PQ75MW2 155 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 SAXO1Q8IYX7 474 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 OR11L1Q8NGX0 322 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 ZNF286AQ9HBT8 521 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 C14orf166Q9Y224 244 aaKnown RBP17.83■□□□□ 0.44
PRDM4-205ENST00000550376 RRP8O43159 456 aaKnown RBP17.83■□□□□ 0.44
PRDM4-205ENST00000550376 S100PBPQ96BU1 408 aa17.83■□□□□ 0.44
PRDM4-205ENST00000550376 TRAV24A0A0B4J272 114 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 GFRA3O60609 400 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 BMP5P22003 454 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 PRR30Q53SZ7 412 aaPredicted RBP17.82■□□□□ 0.44
PRDM4-205ENST00000550376 UBALD1Q8TB05 177 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 OR10C1Q96KK4 312 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 TEX13DA0A0J9YY54 714 aaPredicted RBP17.82■□□□□ 0.44
PRDM4-205ENST00000550376 OR5H1A6NKK0 313 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 MLNRO43193 412 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 RAC2P15153 192 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 ZNF44P15621 663 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 S100A1P23297 94 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 S100A11P31949 105 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 CEBPDP49716 269 aaPredicted RBP17.82■□□□□ 0.44
PRDM4-205ENST00000550376 PIGPP57054 158 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 C1orf185Q5T7R7 199 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 TMEM211Q6ICI0 200 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 FAM180AQ6UWF9 173 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 DHRS11Q6UWP2 260 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 SCGB3A2Q96PL1 93 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 RTL8AQ9BWD3 113 aa17.82■□□□□ 0.44
PRDM4-205ENST00000550376 METTL8Q9H825 291 aaKnown RBP17.82■□□□□ 0.44
PRDM4-205ENST00000550376 CD8AP01732 235 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms