RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CEP295Q9C0D2 2601 aa11.44□□□□□ -0.58
PTCH1-215ENST00000547672 IGLV3-9A0A075B6K5 115 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 MEIKINA0A087WXM9 373 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 TRBV6-6A0A0A6YYG2 114 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 MED19A0JLT2 244 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-215ENST00000547672 A6NLC8 198 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 IFNL4K9M1U5 179 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 OR5H8P0DN80 308 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 C4BPBP20851 252 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 FPR2P25090 351 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 FCN2Q15485 313 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 SMIM21Q3B7S5 101 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 TMEM128Q5BJH2 165 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 MOB1BQ7L9L4 216 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 TMED4Q7Z7H5 227 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 NOXA1Q86UR1 476 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 RELL2Q8NC24 303 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-215ENST00000547672 TMEM185AQ8NFB2 350 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 LILRB4Q8NHJ6 448 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 RNASE6Q93091 150 aaKnown RBP11.43□□□□□ -0.58
PTCH1-215ENST00000547672 FN3KRPQ9HA64 309 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 RANGRFQ9HD47 186 aaPredicted RBP11.43□□□□□ -0.58
PTCH1-215ENST00000547672 SLC23A1Q9UHI7 598 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 C14orf166Q9Y224 244 aaKnown RBP11.43□□□□□ -0.58
PTCH1-215ENST00000547672 OSGIN2Q9Y236 505 aa11.43□□□□□ -0.58
PTCH1-215ENST00000547672 ZGRF1Q86YA3 2104 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 HEATR1Q9H583 2144 aaKnown RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 PRRC2CQ9Y520 2896 aaKnown RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 PIGBOS1A0A0B4J2F0 54 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 CDIPTO14735 213 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 PTBP3O95758 552 aaKnown RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 KNG1P01042 644 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF44P15621 663 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 RAP2BP61225 183 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 SEC61A1P61619 476 aaKnown RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 SORDQ00796 357 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 KCNJ8Q15842 424 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 ATPAF1Q5TC12 328 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 SLC22A25Q6T423 547 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 WFDC8Q8IUA0 241 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 C12orf45Q8N5I9 185 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 SUMF2Q8NBJ7 301 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 OR2Z1Q8NG97 314 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 OR13C8Q8NGS7 320 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 LILRB1Q8NHL6 650 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 PPP1R35Q8TAP8 253 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 PRR7Q8TB68 274 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 TMEM171Q8WVE6 324 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 PHB2Q99623 299 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 DPCDQ9BVM2 203 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 BEX2Q9BXY8 128 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF436Q9C0F3 470 aaPredicted RBP11.42□□□□□ -0.58
PTCH1-215ENST00000547672 BEX1Q9HBH7 125 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 CRIM1Q9NZV1 1036 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 POU2F3Q9UKI9 436 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 GPR132Q9UNW8 380 aa11.42□□□□□ -0.58
PTCH1-215ENST00000547672 TRDCB7Z8K6 153 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 MLNRO43193 412 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 RGS11O94810 467 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 DIRAS3O95661 229 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 NAPSAO96009 420 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 HPXP02790 462 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 TK1P04183 234 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-215ENST00000547672 UCP3P55916 312 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 GMFBP60983 142 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 IL13RA1P78552 427 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 ALKBH6Q3KRA9 238 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 LYG2Q86SG7 212 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 LHFPL1Q86WI0 220 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 MRPL24Q96A35 216 aaKnown RBP11.41□□□□□ -0.58
PTCH1-215ENST00000547672 VRK1Q99986 396 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-215ENST00000547672 SYT3Q9BQG1 590 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 SEC22CQ9BRL7 303 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 HES4Q9HCC6 221 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 KCNJ16Q9NPI9 418 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 TAAR3PQ9P1P4 343 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 MGAT4CQ9UBM8 478 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 IL19Q9UHD0 177 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF230Q9UIE0 474 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-215ENST00000547672 ERRFI1Q9UJM3 462 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-215ENST00000547672 FBXO9Q9UK97 447 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-215ENST00000547672 KCNIP3Q9Y2W7 256 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 ATP23Q9Y6H3 246 aa11.41□□□□□ -0.58
PTCH1-215ENST00000547672 KMT2BQ9UMN6 2715 aaPredicted RBP11.41□□□□□ -0.58
PTCH1-215ENST00000547672 A0A0B4J2A0 478 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 ATP6V1G2-DDX39BF2Z307 99 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 F5H5P2 479 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 RHBDL1O75783 438 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 DUS4LO95620 317 aaKnown RBP11.4□□□□□ -0.58
PTCH1-215ENST00000547672 VSIG10L2P0DP72 767 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 PGAM2P15259 253 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 GLRA1P23415 457 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 LMO1P25800 156 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 S100GP29377 79 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 ZNF81P51508 661 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 HERV-K104P61576 105 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 PAN3Q58A45 887 aaKnown RBP11.4□□□□□ -0.58
PTCH1-215ENST00000547672 FAM209AQ5JX71 171 aa11.4□□□□□ -0.58
PTCH1-215ENST00000547672 OR2AK2Q8NG84 335 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms