RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 RHBDL1O75783 438 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 CCNKO75909 580 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 NRASP01111 189 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 CCL2P13500 99 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 ARSBP15848 533 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 PTAFRP25105 342 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 CHRNA7P36544 502 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 RBP2P50120 134 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 SELENOVP59797 346 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 PPP1CBP62140 327 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 IFITM3Q01628 133 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 SPOCK1Q08629 439 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 FAM27E3Q08E93 113 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 UNC119Q13432 240 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 SSX2Q16385 188 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 ELP2Q6IA86 826 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 ETFRF1Q6IPR1 90 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 MRPL21Q7Z2W9 205 aaKnown RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 BIVMQ86UB2 503 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 COMMD2Q86X83 199 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 ACBD4Q8NC06 268 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 BHLHE23Q8NDY6 225 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 OR4M1Q8NGD0 313 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 OR51D1Q8NGF3 324 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 OR5A2Q8NGI9 324 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 RNASE6Q93091 150 aaKnown RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 MUCL1Q96DR8 90 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 MRPS24Q96EL2 167 aaKnown RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 TM2D1Q9BX74 207 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 TLNRD1Q9H1K6 362 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 SAV1Q9H4B6 383 aaPredicted RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 ZNF442Q9H7R0 627 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 EIF3KQ9UBQ5 218 aaKnown RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 RBMX2Q9Y388 322 aaKnown RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 PRR14LQ5THK1 2151 aa7.17□□□□□ -1.26
VPS29-203ENST00000546588 MAP1BP46821 2468 aaKnown RBP7.17□□□□□ -1.26
VPS29-203ENST00000546588 A0A0B4J293 547 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A10PA6NDY2 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A18PA6NE21 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A16PA6NEW6 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A20PA6NIJ5 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A8PA6NJQ4 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A7PA6NKC0 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A22PA8MWA6 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A12PA8MX19 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A5PA8MXJ8 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A23PA8MXZ1 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 F8W036 122 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 J3QRK9 145 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 CCL21O00585 134 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 HOXA3O43365 443 aaPredicted RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 ZNF780AO75290 641 aaPredicted RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 NDUFS6O75380 124 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 IGHV3-13P01766 116 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 ADH4P08319 380 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 MELTFP08582 738 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 CSF3P09919 207 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A15PP0C7V4 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A13PP0C7W8 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A14PP0C7W9 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FAM90A24PP0C7X0 464 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 GLRXP35754 106 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 TALDO1P37837 337 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 PTGFRP43088 359 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 PTH2RP49190 550 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 BCAP31P51572 246 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 NKX2-5P52952 324 aaPredicted RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 ART1P52961 327 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 RPS23P62266 143 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 SSBP1Q04837 148 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 SMCO1Q147U7 214 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 P2RY14Q15391 338 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 SPATA46Q5T0L3 261 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 ZDHHC23Q8IYP9 409 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 ASCC1Q8N9N2 400 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 PNLDC1Q8NA58 520 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 RNASE11Q8TAA1 199 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 KCNG3Q8TAE7 436 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 SYNPRQ8TBG9 265 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 SLC25A40Q8TBP6 338 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 KLF14Q8TD94 323 aaPredicted RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 DTD1Q8TEA8 209 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 SMIM4Q8WVI0 70 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 OR5P3Q8WZ94 311 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 GTF3AQ92664 365 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 PKIBQ9C010 78 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 FGF23Q9GZV9 251 aaPredicted RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 CST11Q9H112 138 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 OR51B6Q9H340 312 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 UNKLQ9H9P5 680 aaKnown RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 ZNF107Q9UII5 783 aaPredicted RBP7.16□□□□□ -1.26
VPS29-203ENST00000546588 RAB22AQ9UL26 194 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 POMT1Q9Y6A1 747 aa7.16□□□□□ -1.26
VPS29-203ENST00000546588 A0A0G2JMP0 313 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 A0A0X1KG70 313 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 A0A1W2PR80 420 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 GGT3PA6NGU5 568 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 HMX3A6NHT5 357 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 H3BSH0 61 aa7.15□□□□□ -1.26
VPS29-203ENST00000546588 SULT1C2O00338 296 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms