RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 ROM1Q03395 351 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 MESP2Q0VG99 397 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 SMIM21Q3B7S5 101 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 MS4A10Q96PG2 267 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 GPR87Q9BY21 358 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 OR5AC2Q9NZP5 309 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 CLCF1Q9UBD9 225 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 TDRD15B5MCY1 1934 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 WNK3Q9BYP7 1800 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 DVL1O14640 695 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 GEMIN2O14893 280 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 CHST1O43916 411 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 HOXD4P09016 255 aaPredicted RBP10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 NDUFB7P17568 137 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 RPS16P62249 146 aaKnown RBP10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 C1orf53Q5VUE5 145 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 LINC00518Q8N0U6 118 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 CADM4Q8NFZ8 388 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 KISS1RQ969F8 398 aaPredicted RBP10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 TAAR3PQ9P1P4 343 aa10.77□□□□□ -0.69
NPC1L1-204ENST00000546276 PARP14Q460N5 1801 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 GALR2O43603 387 aaPredicted RBP10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 DXOO77932 396 aaKnown RBP10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 ZP1P60852 638 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 RNF151Q2KHN1 245 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 PLAC9Q5JTB6 97 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 C9orf50Q5SZB4 431 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 SMIM15Q7Z3B0 74 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 PACRGQ96M98 296 aaPredicted RBP10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 CHEK1O14757 476 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 KLF4O43474 513 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 NGFRP08138 427 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 CHRNA7P36544 502 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 MDH2P40926 338 aaKnown RBP10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 FAM3AP98173 230 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 SPEM1Q8N4L4 309 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 SLC24A4Q8NFF2 622 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 OR10G4Q8NGN3 311 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 OR10G9Q8NGN4 311 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 OR10G7Q8NGN6 311 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 NEIL1Q96FI4 390 aaPredicted RBP10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 SYNGR2O43760 224 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 LY86O95711 162 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 NGFP01138 241 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 PATE4P0C8F1 98 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 KIR2DL1P43626 348 aaPredicted RBP10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 PRSS12P56730 875 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 MGAT2Q10469 447 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 ZNF154Q13106 437 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 ATP6V1FQ16864 119 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 C1orf100Q5SVJ3 147 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 RHBDD2Q6NTF9 364 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 LDLRAD3Q86YD5 345 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 CHRDL1Q9BU40 450 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 CHST5Q9GZS9 411 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 PILRAQ9UKJ1 303 aa10.76□□□□□ -0.69
NPC1L1-204ENST00000546276 IFI6P09912 130 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 OR5G3P0C626 314 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 ZNF383Q8NA42 475 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 SCCPDHQ8NBX0 429 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 TMEM147Q9BVK8 224 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 COMMD5Q9GZQ3 224 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 GPR132Q9UNW8 380 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 NKX2-6A6NCS4 301 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 MPTX1A8MV57 137 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 ZNF205O95201 554 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 PTBP3O95758 552 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 CDC34P49427 236 aaPredicted RBP10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 ERVS71-1P61550 626 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 ZNF718Q3SXZ3 478 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 C9orf40Q8IXQ3 194 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 C17orf78Q8N4C9 275 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 OR2T10Q8NGZ9 312 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 SNX22Q96L94 193 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 SMDT1Q9H4I9 107 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 UBE2ZQ9H832 354 aaPredicted RBP10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 GPR27Q9NS67 375 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 YBX2Q9Y2T7 364 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 BPIFB3P59826 476 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 ERHP84090 104 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 OR10A7Q8NGE5 316 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 TLNRD1Q9H1K6 362 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 OCIAD1Q9NX40 245 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 TRDCB7Z8K6 153 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 CYC1P08574 325 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 RPS23P62266 143 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 NSUN5P2Q63ZY6 315 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 GAPTQ8N292 157 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 APOBEC4Q8WW27 367 aaKnown RBP10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 NGBQ9NPG2 151 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 DECR2Q9NUI1 292 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 PRSS50Q9UI38 385 aa10.75□□□□□ -0.69
NPC1L1-204ENST00000546276 A0A0G2JK05 382 aa10.74□□□□□ -0.69
NPC1L1-204ENST00000546276 OR2M5A3KFT3 312 aa10.74□□□□□ -0.69
NPC1L1-204ENST00000546276 SLC22A20A6NK97 555 aa10.74□□□□□ -0.69
NPC1L1-204ENST00000546276 HSBP1O75506 76 aa10.74□□□□□ -0.69
NPC1L1-204ENST00000546276 HNRNPA3P51991 378 aaKnown RBP10.74□□□□□ -0.69
NPC1L1-204ENST00000546276 FAM78BQ5VT40 261 aa10.74□□□□□ -0.69
NPC1L1-204ENST00000546276 TMEM211Q6ICI0 200 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms