RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ZNF729A6NN14 1252 aaPredicted RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 H3BQ15 152 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 MPPED1O15442 326 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 SPRY1O43609 319 aaPredicted RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 SYNGR3O43761 229 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 DBHP09172 617 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 CST2P09228 141 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 CEACAM1P13688 526 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 NKX2-1P43699 371 aaPredicted RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 MALLQ13021 153 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 SRSF7Q16629 238 aaKnown RBP eCLIP7.58□□□□□ -1.2
TDP1-204ENST00000545686 KRTAP27-1Q3LI81 207 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 DNLZQ5SXM8 178 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 C20orf196Q8IYI0 205 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 ZNF784Q8NCA9 323 aaPredicted RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 CLEC18CQ8NCF0 446 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 OR13D1Q8NGV5 346 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 RBMXL1Q96E39 390 aaKnown RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 ZNF385AQ96PM9 386 aaKnown RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 SPSB2Q99619 263 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 RBM24Q9BX46 236 aaKnown RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 DEFB126Q9BYW3 111 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 FAM86C1Q9NVL1 165 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 IGSF23A1L1A6 192 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 GEMIN2O14893 280 aaKnown RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 DNPH1O43598 174 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 SCRG1O75711 98 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 PPYP01298 95 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 HBE1P02100 147 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 SRP19P09132 144 aaKnown RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 TCN2P20062 427 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 AADACP22760 399 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 ZNF506Q5JVG8 444 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 ZNF385CQ66K41 422 aaPredicted RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 OR10G4Q8NGN3 311 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 OR11L1Q8NGX0 322 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 RAB39BQ96DA2 213 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 TP53RKQ96S44 253 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 PAPOLGQ9BWT3 736 aaKnown RBP7.58□□□□□ -1.2
TDP1-204ENST00000545686 TREM2Q9NZC2 230 aa7.58□□□□□ -1.2
TDP1-204ENST00000545686 SZT2Q5T011 3432 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 NKX2-6A6NCS4 301 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A10PA6NDY2 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A18PA6NE21 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A16PA6NEW6 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 OR6C6A6NF89 314 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A20PA6NIJ5 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A8PA6NJQ4 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A7PA6NKC0 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A22PA8MWA6 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A12PA8MX19 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A5PA8MXJ8 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A23PA8MXZ1 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 B4DEV8 164 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 HSD17B6O14756 317 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 F10P00742 488 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 NRASP01111 189 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A15PP0C7V4 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A13PP0C7W8 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A14PP0C7W9 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM90A24PP0C7X0 464 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 S100A2P29034 98 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 FUT6P51993 359 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 RBM11P57052 281 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 OR8G1Q15617 311 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 PIGYQ3MUY2 71 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 NCMAPQ5T1S8 102 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 SLC35E3Q7Z769 313 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 DPPA2Q7Z7J5 298 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 SLC25A45Q8N413 288 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 ZNF610Q8N9Z0 462 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 OR1F12Q8NHA8 337 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 MR1Q95460 341 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 RARRES2Q99969 163 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 SF3B5Q9BWJ5 86 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 DKKL1Q9UK85 242 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 ST3GAL6Q9Y274 331 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 PIGBOS1A0A0B4J2F0 54 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 IGKV1-12A0A0C4DH73 117 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FAM24AA6NFZ4 105 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 ZNF724A8MTY0 619 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 GPR37O15354 613 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 TGOLN2O43493 480 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 SCAF4O95104 1147 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 TIAF1O95411 115 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 SLC34A2O95436 690 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 IGKV1D-12P01611 117 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 FUT3P21217 361 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 RGS19P49795 217 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 DSCR4P56555 118 aaPredicted RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 UBE2KP61086 200 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 VAMP2P63027 116 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 TLE4Q04727 773 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 ELOBQ15370 118 aa7.57□□□□□ -1.2
TDP1-204ENST00000545686 MEX3BQ6ZN04 569 aaKnown RBP7.57□□□□□ -1.2
TDP1-204ENST00000545686 ZNF574Q6ZN55 896 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms