RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 GP2P55259 537 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 PIGPP57054 158 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 PJVKQ0ZLH3 352 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 PDCD1Q15116 288 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 POM121L2Q96KW2 1035 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 RNF7Q9UBF6 113 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 A0A0J9YW62 118 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 A0A1B0GUH1 482 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 A0A1W2PRD5 423 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 A0A1W2PRF3 423 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 A0A1W2PRM7 423 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF785A8K8V0 405 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2J3O76001 311 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ERGP11308 486 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 MDH2P40926 338 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 GPR6P46095 362 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 OR3A4PP47883 348 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CLDN20P56880 219 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ETFDHQ16134 617 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 MOGAT2Q3SYC2 334 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ANGPTL4Q9BY76 406 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 PLEKHA2Q9HB19 425 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 FOXJ2Q9P0K8 574 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CLN8Q9UBY8 286 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 MSRB2Q9Y3D2 182 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 FOCADQ5VW36 1801 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 PLXNA1Q9UIW2 1896 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 F2RL2O00254 374 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CT45A10P0DMU9 189 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 DHODHQ02127 395 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF816Q0VGE8 651 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TESK1Q15569 626 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 PLPPR5Q32ZL2 321 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 VWA1Q6PCB0 445 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CD300LDQ6UXZ3 194 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 NAA40Q86UY6 237 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 COMMD7Q86VX2 200 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 SPICQ8N5J4 248 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 MEGF10Q96KG7 1140 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM56Q96MV1 263 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 HEXA-AS1Q9H8Q6 139 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TNFRSF19Q9NS68 423 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CCSO14618 274 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CD3DP04234 171 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 HLA-DOBP13765 273 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 EMP1P54849 157 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TAS2R45P59539 299 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TAS2R60P59551 318 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 SPCS3P61009 180 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 BAMBIQ13145 260 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 ACOT7LQ6ZUV0 252 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2W3Q7Z3T1 314 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 OR2H1Q9GZK4 316 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEM38BQ9NVV0 291 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 OPN4Q9UHM6 478 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 CES1P1Q9UKY3 287 aa6.08□□□□□ -1.44
SRGAP1-206ENST00000543397 LOC101059948A0A1B0GTJ6 334 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 COL6A6A6NMZ7 2263 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 GPR31O00270 319 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 NGFRP08138 427 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 MESTQ5EB52 335 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 TSPO2Q5TGU0 170 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 MRGPRGQ86SM5 289 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 MARCH1Q8TCQ1 289 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ALKBH7Q9BT30 221 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 NMES1Q9C002 83 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 FAM206AQ9NX38 181 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 TREM2Q9NZC2 230 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 PSG11Q9UQ72 335 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 GAB2Q9UQC2 676 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 SPTBN1Q01082 2364 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 AKAP6Q13023 2319 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 TRPM7Q96QT4 1865 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 DBX1A6NMT0 343 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 DEFB108AA8MXU0 73 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 PDCD6O75340 191 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 NME2P22392 152 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC25A40Q8TBP6 338 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 LPAR2Q9HBW0 351 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ADGRL4Q9HBW9 690 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 RPS10P5Q9NQ39 176 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ICAM5Q9UMF0 924 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 RPS10-NUDT3A0A1W2PQS6 291 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 H0Y980 276 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 J3QR89 54 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 NME2P1O60361 137 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 IGLV3-19P01714 112 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF25P17030 456 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ACKR3P25106 362 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 DCTDP32321 178 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 CEACAM6P40199 344 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 UBE2G1P62253 170 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF415Q09FC8 603 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 C20orf196Q8IYI0 205 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 GUCD1Q96NT3 240 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 ZNF436Q9C0F3 470 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 SLC25A32Q9H2D1 315 aa6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 TMEFF2Q9UIK5 374 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-206ENST00000543397 CCL27Q9Y4X3 112 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms