RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 ISG15P05161 165 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 MRPL3P09001 348 aaKnown RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 UBCP0CG48 685 aaKnown RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 CCL1P22362 96 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 GLRA1P23415 457 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 ACKR3P25106 362 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 TGM4P49221 684 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 CCR9P51686 369 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 HCCSP53701 268 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 CAV3P56539 151 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 SEC61A1P61619 476 aaKnown RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 ACTA2P62736 377 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 ACTG2P63267 376 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 RPL36AP83881 106 aaKnown RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 CDONQ4KMG0 1287 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 TMEM244Q5VVB8 128 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 LPCAT4Q643R3 524 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 TMEM42Q69YG0 159 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 METAP1DQ6UB28 335 aaPredicted RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 C12orf54Q6X4T0 127 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 MOB3CQ70IA8 216 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 TMEM86BQ8N661 226 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 ACBD7Q8N6N7 88 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 KIR3DL3Q8N743 410 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 TMEM217Q8N7C4 229 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 SCCPDHQ8NBX0 429 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 LY6G5BQ8NDX9 201 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF555Q8NEP9 628 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 OR10H4Q8NGA5 316 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 PP6455Q8WZ26 134 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 STMN2Q93045 179 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 WDFY2Q96P53 400 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 APOL4Q9BPW4 351 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 PKIBQ9C010 78 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 SEBOXQ9HB31 216 aaPredicted RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 RHOFQ9HBH0 211 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 S100A14Q9HCY8 104 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 NLKQ9UBE8 527 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 MRM2Q9UI43 246 aaKnown RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 COPS3Q9UNS2 423 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 SLC22A13Q9Y226 551 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 PIGLQ9Y2B2 252 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 KLHDC2Q9Y2U9 406 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 RPL36Q9Y3U8 105 aaKnown RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 GMPPBQ9Y5P6 360 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 V9GYS6 101 aa4.7□□□□□ -1.66
SUDS3-202ENST00000541280 TEP1Q99973 2627 aaKnown RBP4.7□□□□□ -1.66
SUDS3-202ENST00000541280 A0A1B0GUS0 222 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 LOC100130705A0A1B0GUX0 176 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 SAC3D1A6NKF1 404 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 IFITM10A6NMD0 228 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 OR2AT4A6NND4 320 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 E9PQ18 207 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 J3QT63 122 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 M0R1W7 72 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 DVL1O14640 695 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 EI24O14681 340 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 SIGLEC5O15389 551 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 SRSF10O75494 262 aaKnown RBP4.69□□□□□ -1.66
SUDS3-202ENST00000541280 RPP14O95059 124 aaKnown RBP4.69□□□□□ -1.66
SUDS3-202ENST00000541280 VENTXO95231 258 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 CYB5AP00167 134 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 TTRP02766 147 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 PRKACBP22694 351 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 PRTN3P24158 256 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 EEF1B2P24534 225 aaKnown RBP4.69□□□□□ -1.66
SUDS3-202ENST00000541280 EPHA2P29317 976 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 POLR2IP36954 125 aaKnown RBP4.69□□□□□ -1.66
SUDS3-202ENST00000541280 GPM6AP51674 278 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 FUT6P51993 359 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 FGF12P61328 243 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 ACTG1P63261 375 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 RAB40BQ12829 278 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 IL24Q13007 206 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 BAMBIQ13145 260 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 MED21Q13503 144 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 SMIM21Q3B7S5 101 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 WDR38Q5JTN6 314 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 FAM201AQ5SY85 155 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 TTC23Q5W5X9 447 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 PLCXD3Q63HM9 321 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 NCR3LG1Q68D85 454 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 LYPD2Q6UXB3 125 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 Q6ZSV7 163 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF826PQ6ZT77 177 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 BTN2A1Q7KYR7 527 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF771Q7L3S4 317 aaPredicted RBP4.69□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 WDR86Q86TI4 376 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 CATSPERDQ86XM0 798 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 CALHM1Q8IU99 346 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 Q8IYB0 196 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 ENTHD1Q8IYW4 607 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 SYS1Q8N2H4 156 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 CBR4Q8N4T8 237 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 ZNF561Q8N587 486 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 PACRGLQ8N7B6 248 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 POC1AQ8NBT0 407 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 DNAAF1Q8NEP3 725 aa4.69□□□□□ -1.66
SUDS3-202ENST00000541280 OR5D13Q8NGL4 314 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms