RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 RFKQ969G6 155 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 AURKAIP1Q9NWT8 199 aaPredicted RBP11.32□□□□□ -0.6
SNHG1-213ENST00000540725 GLS2Q9UI32 602 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 UBE2J1Q9Y385 318 aaPredicted RBP11.32□□□□□ -0.6
SNHG1-213ENST00000540725 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 FCGR1AP12314 374 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 ZNF20P17024 532 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 LOXL3P58215 753 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 CDC42P60953 191 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 CD83Q01151 205 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 PDZK1IP1Q13113 114 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 BAIAP2L2Q6UXY1 529 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 C16orf82Q7Z2V1 217 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 ABHD12Q8N2K0 398 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 RFT1Q96AA3 541 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 SPSB1Q96BD6 273 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 FGGYQ96C11 551 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 OPALINQ96PE5 141 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 GAL3ST2Q9H3Q3 398 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 HMG20AQ9NP66 347 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 EXOSC4Q9NPD3 245 aaKnown RBP11.31□□□□□ -0.6
SNHG1-213ENST00000540725 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 OAZ3Q9UMX2 235 aa11.31□□□□□ -0.6
SNHG1-213ENST00000540725 TRGV10A0A0A0MS01 117 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 SH2D1BO14796 132 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 OR2H2O95918 312 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 CD33P20138 364 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 CDK2P24941 298 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 CD24P25063 80 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 BDH1Q02338 343 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 BNIP1Q12981 228 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 OR52W1Q6IF63 320 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 HEPN1Q6WQI6 88 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 ZNF596Q8TC21 504 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 CAPSLQ8WWF8 208 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 AKR1E2Q96JD6 320 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 LIN7BQ9HAP6 207 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 GSTK1Q9Y2Q3 226 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 ZNF281Q9Y2X9 895 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 COL7A1Q02388 2944 aa11.3□□□□□ -0.6
SNHG1-213ENST00000540725 NBEAL2Q6ZNJ1 2754 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 IGKV1-12A0A0C4DH73 117 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 FUOMA2VDF0 154 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 FAM172BPA6NC97 362 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 ALX3O95076 343 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 IGKV1D-12P01611 117 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 IGLV1-47P01700 117 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 ISG15P05161 165 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 OCM2P0CE71 109 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 OCMP0CE72 109 aaPredicted RBP11.29□□□□□ -0.6
SNHG1-213ENST00000540725 BRS3P32247 399 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 NANOS3P60323 173 aaKnown RBP11.29□□□□□ -0.6
SNHG1-213ENST00000540725 AESQ08117 197 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 FOXB2Q5VYV0 432 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 FDX2Q6P4F2 183 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 RTN4RL2Q86UN3 420 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 WFDC9Q8NEX5 89 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 CORO2AQ92828 525 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 STMN2Q93045 179 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 CENPNQ96H22 339 aaPredicted RBP11.29□□□□□ -0.6
SNHG1-213ENST00000540725 SPACA5Q96QH8 159 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 MBOAT4Q96T53 435 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 SLC25A33Q9BSK2 321 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 OSBPL10Q9BXB5 764 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 TAS2R3Q9NYW6 316 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 FRRS1LQ9P0K9 344 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 PCDHGB5Q9Y5G0 923 aa11.29□□□□□ -0.6
SNHG1-213ENST00000540725 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 LEUTXA8MZ59 168 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 SLC16A6O15403 523 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 KDM4BO94953 1096 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 HTR1AP08908 422 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 PF4V1P10720 104 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 ZNF44P15621 663 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 IGLL1P15814 213 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 LMO1P25800 156 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 CD34P28906 385 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 GDNFP39905 211 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 GLIPR1P48060 266 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 ARHGDIBP52566 201 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 ABCA11PQ4W5N1 156 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 TCTEX1D4Q5JR98 221 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 CCDC121Q6ZUS5 278 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 KCTD20Q7Z5Y7 419 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 CENPVQ7Z7K6 275 aaPredicted RBP11.28□□□□□ -0.6
SNHG1-213ENST00000540725 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 OR5D18Q8NGL1 313 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 OR13C9Q8NGT0 318 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 COMMD4Q9H0A8 199 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 ZNF286AQ9HBT8 521 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 IMPAD1Q9NX62 359 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 HHLA2Q9UM44 414 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 TCRBV4S1A1TA0A5B7 111 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 DAPL1A0PJW8 107 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 ODAMA1E959 279 aa11.28□□□□□ -0.6
SNHG1-213ENST00000540725 OR2F2O95006 317 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms