RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CACNG6Q9BXT2 260 aa14.44□□□□□ -0.1
COPS3-212ENST00000539941 FGF23Q9GZV9 251 aaPredicted RBP14.44□□□□□ -0.1
COPS3-212ENST00000539941 TRAV6A0A075B6T7 132 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 IGKV1-12A0A0C4DH73 117 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 PLSCR5A0PG75 271 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 MFNGO00587 321 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 SOCS1O15524 211 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 LILRA1O75019 489 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 CA11O75493 328 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 CYB5AP00167 134 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 PLATP00750 562 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 IGKV1D-12P01611 117 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 CRYAAP02489 173 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 S100A8P05109 93 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 GNB3P16520 340 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 KITLGP21583 273 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 CCKARP32238 428 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 ZNF83P51522 516 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 TMEM50BP56557 158 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 TAS2R19P59542 299 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 PSG7Q13046 419 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 PLAC9Q5JTB6 97 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 FAM209BQ5JX69 171 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 SEZ6L2Q6UXD5 910 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 CALHM1Q8IU99 346 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 MKXQ8IYA7 352 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 TMEM229BQ8NBD8 167 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 ASB13Q8WXK3 278 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 PDCD10Q9BUL8 212 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 RTL8AQ9BWD3 113 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 SLC25A32Q9H2D1 315 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 ZMAT3Q9HA38 289 aaKnown RBP14.43□□□□□ -0.1
COPS3-212ENST00000539941 SHANK1Q9Y566 2161 aa14.43□□□□□ -0.1
COPS3-212ENST00000539941 HMSDA8MTL9 139 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 SERPINE3A8MV23 424 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 J3QKU1 62 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 M0R1B8 84 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 PEX14O75381 377 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 MT-ND4P03905 459 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 AKAIN1P0CW23 69 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 CA6P23280 308 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 BLVRBP30043 206 aaPredicted RBP14.42□□□□□ -0.1
COPS3-212ENST00000539941 ELP2Q6IA86 826 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 SLC25A26Q70HW3 274 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 FJX1Q86VR8 437 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 OSR2Q8N2R0 312 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 PKIBQ9C010 78 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 NFYAP23511 347 aaPredicted RBP14.42□□□□□ -0.1
COPS3-212ENST00000539941 GIFP27352 417 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 GCH1P30793 250 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 MPV17P39210 176 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 MICBQ29980 383 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 TRAPPC6BQ86SZ2 158 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 OR8S1Q8NH09 359 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 ELMOD3Q96FG2 381 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 ARHGAP5-AS1Q96IT6 56 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 NKX6-2Q9C056 277 aaPredicted RBP14.42□□□□□ -0.1
COPS3-212ENST00000539941 HSF4Q9ULV5 492 aa14.42□□□□□ -0.1
COPS3-212ENST00000539941 A0A1B0GUH1 482 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 TMEM82A0PJX8 343 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A10PA6NDY2 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A18PA6NE21 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A16PA6NEW6 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A20PA6NIJ5 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A8PA6NJQ4 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A7PA6NKC0 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A22PA8MWA6 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A12PA8MX19 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A5PA8MXJ8 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A23PA8MXZ1 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 TEX46H3BTG2 121 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 SSX5O60225 188 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 RGS11O94810 467 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A15PP0C7V4 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A13PP0C7W8 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A14PP0C7W9 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 FAM90A24PP0C7X0 464 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 MPZP25189 248 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 S100A11P31949 105 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 TMEM255AQ5JRV8 349 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 UQCC3Q6UW78 93 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 OR8G5Q8NG78 346 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 PCNPQ8WW12 178 aaKnown RBP14.41□□□□□ -0.1
COPS3-212ENST00000539941 CXorf58Q96LI9 332 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 PECRQ9BY49 303 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 RHOFQ9HBH0 211 aa14.41□□□□□ -0.1
COPS3-212ENST00000539941 POLEQ07864 2286 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 LRP5LA4QPB2 252 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 TMEM210A6NLX4 147 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 PYCARD-AS1I3L0S3 204 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 APOC3P02656 99 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 S100A9P06702 114 aaKnown RBP14.4□□□□□ -0.1
COPS3-212ENST00000539941 SFTPBP07988 381 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 GLRXP35754 106 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 RPS23P62266 143 aaKnown RBP14.4□□□□□ -0.1
COPS3-212ENST00000539941 IL24Q13007 206 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 FAM76BQ5HYJ3 339 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 OR4C16Q8NGL9 310 aa14.4□□□□□ -0.1
COPS3-212ENST00000539941 DVL3Q92997 716 aaPredicted RBP14.4□□□□□ -0.1
COPS3-212ENST00000539941 LRRC46Q96FV0 321 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms