RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ABHD1Q96SE0 405 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 DPCDQ9BVM2 203 aaPredicted RBP9.97□□□□□ -0.81
VTN-202ENST00000539746 CLEC4MQ9H2X3 399 aaPredicted RBP9.97□□□□□ -0.81
VTN-202ENST00000539746 DPAGT1Q9H3H5 408 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 ZNF665Q9H7R5 613 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 UFSP2Q9NUQ7 469 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 NECAP2Q9NVZ3 263 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 ETAA1Q9NY74 926 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 CACNG2Q9Y698 323 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 IGSF10Q6WRI0 2623 aa9.97□□□□□ -0.81
VTN-202ENST00000539746 ATRXP46100 2492 aa9.96□□□□□ -0.81
VTN-202ENST00000539746 PPIAL4EA0A075B759 164 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 TRBV6-6A0A0A6YYG2 114 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 IGKV1-12A0A0C4DH73 117 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 ANKRD20A5PA0PJZ0 165 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 TMEM235A6NFC5 223 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 OR2AT4A6NND4 320 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 PPIAL4DF5H284 164 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 MGST3O14880 152 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 SYNGR1O43759 233 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 ORC5O43913 435 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 PFDN1O60925 122 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 LILRA1O75019 489 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 IGKV1D-12P01611 117 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 PPIAL4FP0DN26 164 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 GNB3P16520 340 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 AMY2BP19961 511 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 ANOS1P23352 680 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 RFX2P48378 723 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 RAG2P55895 527 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 PRSS12P56730 875 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 IL13RA1P78552 427 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 CCL8P80075 99 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 ALKBH6Q3KRA9 238 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 TEX36Q5VZQ5 186 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 DCDC5Q6ZRR9 648 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 C1QL2Q7Z5L3 287 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 HOGA1Q86XE5 327 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 ZNF565Q8N9K5 539 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 OR5H2Q8NGV7 314 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 OR10K1Q8NGX5 313 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 OR52I2Q8NH67 350 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 CCDC107Q8WV48 283 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 SNAPC3Q92966 411 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 YIPF5Q969M3 257 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 TRAF4Q9BUZ4 470 aaPredicted RBP9.96□□□□□ -0.82
VTN-202ENST00000539746 UBTD1Q9HAC8 227 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 TMEM106BQ9NUM4 274 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 ZNF701Q9NV72 531 aaPredicted RBP9.96□□□□□ -0.82
VTN-202ENST00000539746 OR6C3Q9NZP0 311 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 PPIAL4AQ9Y536 164 aa9.96□□□□□ -0.82
VTN-202ENST00000539746 MYO7BQ6PIF6 2116 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 ANKHD1Q8IWZ3 2542 aaKnown RBP9.95□□□□□ -0.82
VTN-202ENST00000539746 hCG_1809904A0A1W2PP81 198 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 A0A1W2PPE2 198 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 A0A1W2PR64 198 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 A0A1W2PRV1 198 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 H0YL77 283 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 SOCS1O15524 211 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 PRAF2O60831 178 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 RAB3DO95716 219 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 DHFRP00374 187 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 LHBP01229 141 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 TK1P04183 234 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 PLA2G2AP14555 144 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 GZMHP20718 246 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 PRDX2P32119 198 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 NPY4RP50391 375 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 EFNA4P52798 201 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 TSPAN5P62079 268 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 RBMS2Q15434 407 aaKnown RBP9.95□□□□□ -0.82
VTN-202ENST00000539746 PIGYQ3MUY2 71 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 LRRC10Q5BKY1 277 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 ATPAF1Q5TC12 328 aaPredicted RBP9.95□□□□□ -0.82
VTN-202ENST00000539746 PRAMEF6Q5VXH4 476 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 OLFML2AQ68BL7 652 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 STEAP1BQ6NZ63 245 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 GDPD3Q7L5L3 318 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 BEST4Q8NFU0 473 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 OR4K15Q8NH41 348 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 NINJ1Q92982 152 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 DVL3Q92997 716 aaPredicted RBP9.95□□□□□ -0.82
VTN-202ENST00000539746 TRIM63Q969Q1 353 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 CREB3L1Q96BA8 519 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 DMRTB1Q96MA1 342 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 CHODLQ9H9P2 273 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 MYEF2Q9P2K5 600 aaKnown RBP9.95□□□□□ -0.82
VTN-202ENST00000539746 NUBP2Q9Y5Y2 271 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 BSNQ9UPA5 3926 aa9.95□□□□□ -0.82
VTN-202ENST00000539746 KALRNO60229 2985 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 A0A1B0GVG6 124 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 FAM221AA4D161 298 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 FOXI3A8MTJ6 420 aaPredicted RBP9.94□□□□□ -0.82
VTN-202ENST00000539746 TMEM178BH3BS89 294 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 NDUFS8O00217 210 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 SPINT2O43291 252 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 SLC22A5O76082 557 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 OR2H2O95918 312 aa9.94□□□□□ -0.82
VTN-202ENST00000539746 FCER2P06734 321 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms