RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KIAA1456Q9P272 454 aa12.82□□□□□ -0.36
CACNB1-206ENST00000539338 PCOLCE2Q9UKZ9 415 aa12.82□□□□□ -0.36
CACNB1-206ENST00000539338 PSG11Q9UQ72 335 aa12.82□□□□□ -0.36
CACNB1-206ENST00000539338 LYZL6O75951 148 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 BGLAPP02818 100 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 ZNF83P51522 516 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 ZDHHC11Q9H8X9 412 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 ST6GALNAC2Q9UJ37 374 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 A0A1W2PQF6 199 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 FOXS1O43638 330 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 FCGR3BO75015 233 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 IGF2P01344 180 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 HOXA6P31267 233 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 SOX8P57073 446 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 COMMD1Q8N668 190 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 UQCC1Q9NVA1 299 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 MRPS18AQ9NVS2 196 aaKnown RBP12.81□□□□□ -0.36
CACNB1-206ENST00000539338 FOXD3Q9UJU5 478 aaPredicted RBP12.81□□□□□ -0.36
CACNB1-206ENST00000539338 ZNF250P15622 560 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 CSN1S1P47710 185 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 GNG10P50151 68 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 NANOS3P60323 173 aaKnown RBP12.81□□□□□ -0.36
CACNB1-206ENST00000539338 DNASE2BQ8WZ79 361 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 OPN4Q9UHM6 478 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 ZNF835Q9Y2P0 537 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 KLHDC2Q9Y2U9 406 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
CACNB1-206ENST00000539338 SEC16AO15027 2179 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 TGOLN2O43493 480 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 TNFRSF1AP19438 455 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 BPIFB3P59826 476 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 SLC38A11Q08AI6 406 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 INPP5JQ15735 1006 aaPredicted RBP12.81□□□□□ -0.36
CACNB1-206ENST00000539338 SPNS3Q6ZMD2 512 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 C9orf40Q8IXQ3 194 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 RAB1CQ92928 201 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 PRSS27Q9BQR3 290 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 UCK1Q9HA47 277 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 GAR1Q9NY12 217 aaKnown RBP12.81□□□□□ -0.36
CACNB1-206ENST00000539338 LSM2Q9Y333 95 aaKnown RBP12.81□□□□□ -0.36
CACNB1-206ENST00000539338 PTP4A3O75365 173 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 FOSL1P15407 271 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 FFAR4Q5NUL3 377 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 FAM24BQ8N5W8 94 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 SIGLECL1Q8N7X8 197 aa12.81□□□□□ -0.36
CACNB1-206ENST00000539338 COX7A2P2O60397 106 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 CCL4P13236 92 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 POLR2GP62487 172 aaKnown RBP eCLIP12.8□□□□□ -0.36
CACNB1-206ENST00000539338 Q3ZCU0 254 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 RNF212Q495C1 297 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 D2HGDHQ8N465 521 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 PHYHIPLQ96FC7 376 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 ZNF251Q9BRH9 671 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 NXF2Q9GZY0 626 aaKnown RBP12.8□□□□□ -0.36
CACNB1-206ENST00000539338 IGHV3-13P01766 116 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 IGHV3-7P01780 117 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 OIT3Q8WWZ8 545 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 GPR137Q96N19 417 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 ANXA10Q9UJ72 324 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 SERTM2A0A1B0GWG4 89 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 M0QZ24 198 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 SNRPEP62304 92 aaKnown RBP12.8□□□□□ -0.36
CACNB1-206ENST00000539338 M1APQ8TC57 530 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 RPS4Y2Q8TD47 263 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 A1L4Q6 167 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 CRYM-AS1A6NIL9 109 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 GEMIN2O14893 280 aaKnown RBP12.8□□□□□ -0.36
CACNB1-206ENST00000539338 CYC1P08574 325 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 RAC3P60763 192 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 TMEM18Q96B42 140 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 RAB40CQ96S21 281 aa12.8□□□□□ -0.36
CACNB1-206ENST00000539338 PHOX2AO14813 284 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 GREM1O60565 184 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 CRHP06850 196 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 INHBBP09529 407 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 MOB1BQ7L9L4 216 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 OR2D2Q9H210 308 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 PCDHGA9Q9Y5G4 932 aaKnown RBP12.79□□□□□ -0.36
CACNB1-206ENST00000539338 STUMQ69YW2 141 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 POM121L2Q96KW2 1035 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 UCN2Q96RP3 112 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 RGS13O14921 159 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 FUT5Q11128 374 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 IL13RA2Q14627 380 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 MRGPRGQ86SM5 289 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 SLC35B3Q9H1N7 401 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 CTSDP07339 412 aaPredicted RBP12.79□□□□□ -0.36
CACNB1-206ENST00000539338 FGF8P55075 233 aaPredicted RBP12.79□□□□□ -0.36
CACNB1-206ENST00000539338 MGAT2Q10469 447 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 C3AR1Q16581 482 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 FAHD2BQ6P2I3 314 aaPredicted RBP12.79□□□□□ -0.36
CACNB1-206ENST00000539338 ADAD2Q8NCV1 583 aaKnown RBP12.79□□□□□ -0.36
CACNB1-206ENST00000539338 FAHD2AQ96GK7 314 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 PPP1R3EQ9H7J1 279 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 CA10Q9NS85 328 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.79□□□□□ -0.36
CACNB1-206ENST00000539338 ZNF586Q9NXT0 402 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 CYB5R1Q9UHQ9 305 aa12.79□□□□□ -0.36
CACNB1-206ENST00000539338 MAP1LC3B2A6NCE7 125 aa12.78□□□□□ -0.36
CACNB1-206ENST00000539338 VSIG8P0DPA2 414 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms