RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 SYNDIG1LA6NDD5 238 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 PLRG1O43660 514 aaKnown RBP5.83□□□□□ -1.48
USP28-207ENST00000538475 FGF17O60258 216 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 KNG1P01042 644 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 HRASP01112 189 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 THBDP07204 575 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 UMODP07911 640 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 IL6RP08887 468 aaPredicted RBP5.83□□□□□ -1.48
USP28-207ENST00000538475 H2BFMP0C1H6 154 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 GIMD1P0DJR0 217 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 BCL2P10415 239 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 SLC25A6P12236 298 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 ZNF20P17024 532 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 BRS3P32247 399 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 TMEM50BP56557 158 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 HSD17B7P56937 341 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 BPIFB3P59826 476 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 SELENOTP62341 195 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 VAMP2P63027 116 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 GABREP78334 506 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 EWSR1Q01844 656 aaKnown RBP eCLIP5.83□□□□□ -1.48
USP28-207ENST00000538475 COL10A1Q03692 680 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 EGR4Q05215 589 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 AARDQ4LEZ3 155 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 PLAC9Q5JTB6 97 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 ACTL10Q5JWF8 245 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 PLPP4Q5VZY2 271 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 TMEM215Q68D42 235 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 LEMD1Q68G75 181 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 KCNIP4Q6PIL6 250 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 PET117Q6UWS5 81 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 TEX43Q6ZNM6 134 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 TIPARPQ7Z3E1 657 aaKnown RBP5.83□□□□□ -1.48
USP28-207ENST00000538475 NUFIP2Q7Z417 695 aaKnown RBP5.83□□□□□ -1.48
USP28-207ENST00000538475 TMEFF1Q8IYR6 380 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 ZNF248Q8NDW4 579 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 OR52R1Q8NGF1 315 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 OR51G1Q8NGK1 321 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 OR4D5Q8NGN0 318 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 OR2I1PQ8NGU4 316 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 SVIPQ8NHG7 77 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 POC1BQ8TC44 478 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 CORO2AQ92828 525 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 IL22RA2Q969J5 263 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 RERGQ96A58 199 aaPredicted RBP5.83□□□□□ -1.48
USP28-207ENST00000538475 MOB3AQ96BX8 217 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 ARSGQ96EG1 525 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 GMPPAQ96IJ6 420 aaPredicted RBP5.83□□□□□ -1.48
USP28-207ENST00000538475 C1orf147Q96MC9 270 aaPredicted RBP5.83□□□□□ -1.48
USP28-207ENST00000538475 LRRC3BQ96PB8 259 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 SLC46A2Q9BY10 475 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 TPSD1Q9BZJ3 242 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 SMIM3Q9BZL3 60 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 ZNF700Q9H0M5 742 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 ZDHHC4Q9NPG8 344 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 SLC2A4RGQ9NR83 387 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 NECAP2Q9NVZ3 263 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 PILRAQ9UKJ1 303 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 SLC17A4Q9Y2C5 497 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 LIPGQ9Y5X9 500 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 EXPH5Q8NEV8 1989 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 ATG2BQ96BY7 2078 aa5.83□□□□□ -1.48
USP28-207ENST00000538475 DHRS7CA6NNS2 312 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 A8MXE2 369 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 H7BYZ3 331 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 SOX15O60248 233 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 SLC16A7O60669 478 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 SEMA4FO95754 770 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 IL33O95760 270 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 NUDT14O95848 222 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 MPIG6BO95866 241 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 HPRT1P00492 218 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 IGKV1D-16P01601 117 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 TTRP02766 147 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 PPBPP02775 128 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 OPN1LWP04000 364 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 CISD3P0C7P0 127 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 ZNF728P0DKX0 622 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 PEBP1P30086 187 aaKnown RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 HOXC12P31275 282 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 GNG10P50151 68 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 DAP3P51398 398 aaKnown RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 ZNF41P51814 821 aaPredicted RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 CNN1P51911 297 aaKnown RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 FUT7Q11130 342 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 EXOSC7Q15024 291 aaKnown RBP5.82□□□□□ -1.48
USP28-207ENST00000538475 OR8B8Q15620 311 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 TMEM183BQ1AE95 376 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 ODF4Q2M2E3 257 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 SLC22A6Q4U2R8 563 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 ABCA11PQ4W5N1 156 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 PDZD11Q5EBL8 140 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 GLIPR1L1Q6UWM5 242 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 C17orf99Q6UX52 265 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 ZNF66Q6ZN08 573 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 Q6ZSR3 168 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 COX15Q7KZN9 410 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 RNF44Q7L0R7 432 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 DOK3Q7L591 496 aa5.82□□□□□ -1.48
USP28-207ENST00000538475 SSX7Q7RTT5 188 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms