RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 RUNX2Q13950 521 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 MPV17LQ2QL34 196 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 H1FOOQ8IZA3 346 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 TMEM123Q8N131 208 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 OR51A4Q8NGJ6 313 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 TMEM230Q96A57 120 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 C4orf45Q96LM5 186 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 TAS2R4Q9NYW5 299 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 C19orf25Q9UFG5 118 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 A0A1B0GTH9 108 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 HSD11B1P28845 292 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 SFTPDP35247 375 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 CCL20P78556 96 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 MESP2Q0VG99 397 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 ARHGAP11BQ3KRB8 267 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 MRPL2Q5T653 305 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 TEX43Q6ZNM6 134 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF619Q8N2I2 560 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 NPEPL1Q8NDH3 523 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 OR51I2Q9H344 312 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 WDR76Q9H967 626 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 TMEM106BQ9NUM4 274 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 AQP7P3A6NL99 342 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 PSG6Q00889 435 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 IL15RAQ13261 267 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 DEFB110Q30KQ9 67 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 VAX1Q5SQQ9 334 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 DPPA3Q6W0C5 159 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF596Q8TC21 504 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 BCL2L2Q92843 193 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 MMABQ96EY8 250 aaPredicted RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 SLC2A9Q9NRM0 540 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 EHFQ9NZC4 300 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 GNG13Q9P2W3 67 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 BPTFQ12830 3046 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 GDF9O60383 454 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 CNOT4O95628 575 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF117Q03924 483 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 PRDX4Q13162 271 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 MRPL49Q13405 166 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF684Q5T5D7 378 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 C16orf82Q7Z2V1 217 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 SLC35A4Q96G79 324 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 CST9LQ9H4G1 147 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 PNO1Q9NRX1 252 aaKnown RBP9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 TUBD1Q9UJT1 453 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 LOXL2Q9Y4K0 774 aa9.56□□□□□ -0.88
CLSTN3-207ENST00000537408 IGHV2-70DA0A0C4DH43 119 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 FAM166BA8MTA8 275 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 EFNA3P52797 238 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 ARFRP1Q13795 201 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 OR2T10Q8NGZ9 312 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 PATZ1Q9HBE1 687 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 FLRT3Q9NZU0 649 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 A6NJY4 79 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 APOBEC3AP31941 199 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 ECI1P42126 302 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 TAS2R46P59540 309 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 UBE2NP61088 152 aaKnown RBP9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 IL13RA2Q14627 380 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 PRAMEF20Q5VT98 475 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 WDR25Q64LD2 544 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 FAM166AQ6J272 317 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 MYPOPQ86VE0 399 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 VN1R17PQ8TDU5 208 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF775Q96BV0 537 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 SAMD10Q9BYL1 202 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 SDF2L1Q9HCN8 221 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 GPR84Q9NQS5 396 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 COPS7AQ9UBW8 275 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 NAT8Q9UHE5 227 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 ST3GAL6Q9Y274 331 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 DOCK6Q96HP0 2047 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 A0A087WV48 116 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 LOC102723971A0A1B0GUV8 181 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 PROB1E7EW31 1015 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 HRASP01112 189 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 ALOX5APP20292 161 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 KIR2DS3Q14952 304 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 ARL6IP1Q15041 203 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 ACTL10Q5JWF8 245 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 OR10S1Q8NGN2 331 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 CLDND2Q8NHS1 167 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 REEP6Q96HR9 211 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 DGAT2Q96PD7 388 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 WFDC1Q9HC57 220 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 SLC35D1Q9NTN3 355 aa9.55□□□□□ -0.88
CLSTN3-207ENST00000537408 GNB3P16520 340 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 WDR38Q5JTN6 314 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 SULF2Q8IWU5 870 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 C17orf78Q8N4C9 275 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 STPG4Q8N801 248 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 RASD2Q96D21 266 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ZFYVE21Q9BQ24 234 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 MAGT1Q9H0U3 335 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 LOC105371242A0A075B767 164 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ZNF814B7Z6K7 855 aa9.54□□□□□ -0.88
CLSTN3-207ENST00000537408 ST8SIA3O43173 380 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms