RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 ZNF770Q6IQ21 691 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 FAM71F2Q6NXP2 309 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TNFAIP8L2Q6P589 184 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 DHRS11Q6UWP2 260 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ENPP7Q6UWV6 458 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 BTNL8Q6UX41 500 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 NHLRC1Q6VVB1 395 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ZNF534Q76KX8 674 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TMPRSS11BQ86T26 416 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 RTN4RL2Q86UN3 420 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CALHM3Q86XJ0 350 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 LINC00346Q8IVM7 164 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 C4orf19Q8IY42 314 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 C20orf196Q8IYI0 205 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 BEST3Q8N1M1 668 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PNKDQ8N490 385 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 WDTC1Q8N5D0 677 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 COX18Q8N8Q8 333 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 GATSQ8NAP1 163 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SIDT2Q8NBJ9 832 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 NOXO1Q8NFA2 376 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR4D9Q8NGE8 314 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR5A2Q8NGI9 324 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR5D16Q8NGK9 328 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR5AK2Q8NH90 309 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 HAVCR2Q8TDQ0 301 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 GPR148Q8TDV2 347 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SMIM4Q8WVI0 70 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TMEM239Q8WW34 195 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SMPDL3BQ92485 455 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 FRZBQ92765 325 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TSLPQ969D9 159 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MOAP1Q96BY2 351 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MS4A6EQ96DS6 147 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MRAP2Q96G30 205 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SMIM10Q96HG1 83 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 FER1L6-AS2Q96M78 137 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 HARBI1Q96MB7 349 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ZNF75AQ96N20 296 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 IP6K3Q96PC2 410 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CIB3Q96Q77 187 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR5B12Q96R08 314 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PANX1Q96RD7 426 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 IMMP2LQ96T52 175 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MICU1Q9BPX6 476 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ALG12Q9BV10 488 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SLC35B3Q9H1N7 401 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TMEM231Q9H6L2 316 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ZDHHC6Q9H6R6 413 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MTHFD2LQ9H903 347 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 RPF1Q9H9Y2 349 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 AMBNQ9NP70 447 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 FGF20Q9NP95 211 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 KCNJ16Q9NPI9 418 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 YAE1D1Q9NRH1 226 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 FGF21Q9NSA1 209 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TMEM38BQ9NVV0 291 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OSER1Q9NX31 292 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TAS2R8Q9NYW2 309 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ABRACLQ9P1F3 81 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ABI3Q9P2A4 366 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SHPKQ9UHJ6 478 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ASF1AQ9Y294 204 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 LAMTOR2Q9Y2Q5 125 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MRPS16Q9Y3D3 137 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 FIS1Q9Y3D6 152 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CCL27Q9Y4X3 112 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR51B2Q9Y5P1 312 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CSAG2Q9Y5P2 127 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ENPP4Q9Y6X5 453 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TSC2P49815 1807 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SBF1O95248 1867 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 HELZP42694 1942 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 STRCP1A6NGW2 1772 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 COL14A1Q05707 1796 aaKnown RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 MCM3APO60318 1980 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SHROOM3Q8TF72 1996 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SCN8AQ9UQD0 1980 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TRBV24-1A0A075B6N3 115 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TRBV6-7A0A0A0MS04 114 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 IGHV1-69-2A0A0G2JMI3 117 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 A0A1B0GTI1 187 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 A0A1W2PRS3 328 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 IGSF23A1L1A6 192 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 TMEM213A2RRL7 107 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 FAM166BA8MTA8 275 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 UMAD1C9J7I0 102 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 E7EQ34 232 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 K7EPK0 472 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 DCTN6O00399 190 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SLC17A3O00476 420 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 KLK10O43240 276 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 HCRTR1O43613 425 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 PLPP2O43688 288 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 GNG7O60262 68 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 SAP30O75446 220 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 GLSO94925 669 aaPredicted RBP2.11□□□□□ -2.07
SKA3-207ENST00000536239 GJB5O95377 273 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 BRI3O95415 125 aa2.11□□□□□ -2.07
SKA3-207ENST00000536239 DUS4LO95620 317 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms