RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 IL18R1Q13478 541 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 ZIK1Q3SY52 487 aaPredicted RBP14.33□□□□□ -0.12
PCF11-206ENST00000533018 UTS2BQ765I0 119 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 OR5D18Q8NGL1 313 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 OR13C3Q8NGS6 347 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 PYDC1Q8WXC3 89 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 STMN2Q93045 179 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 SPSB1Q96BD6 273 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 SPACA5Q96QH8 159 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 CITED2Q99967 270 aaPredicted RBP14.33□□□□□ -0.12
PCF11-206ENST00000533018 MMP28Q9H239 520 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 GAL3ST2Q9H3Q3 398 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 SEBOXQ9HB31 216 aaPredicted RBP14.33□□□□□ -0.12
PCF11-206ENST00000533018 HMG20AQ9NP66 347 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 ING3Q9NXR8 418 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 HHLA2Q9UM44 414 aa14.33□□□□□ -0.12
PCF11-206ENST00000533018 UBE2J1Q9Y385 318 aaPredicted RBP14.33□□□□□ -0.12
PCF11-206ENST00000533018 FAM172BPA6NC97 362 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 MMP23AO75900 390 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 OR2H2O95918 312 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 ALDOBP05062 364 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 ISG15P05161 165 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 ZNF44P15621 663 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 OR3A1P47881 315 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 DYNLT3P51808 116 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 NANOS3P60323 173 aaKnown RBP14.32□□□□□ -0.12
PCF11-206ENST00000533018 KPNB1Q14974 876 aaKnown RBP14.32□□□□□ -0.12
PCF11-206ENST00000533018 SAMD5Q5TGI4 173 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 PRAMEF5Q5TYX0 476 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 Q6ZS46 218 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 NDUFA11Q86Y39 141 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 ABHD12Q8N2K0 398 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 OR4F17Q8NGA8 305 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 OR13C9Q8NGT0 318 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 CAPSLQ8WWF8 208 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 RNF166Q96A37 237 aaPredicted RBP14.32□□□□□ -0.12
PCF11-206ENST00000533018 OR4F4Q96R69 305 aa14.32□□□□□ -0.12
PCF11-206ENST00000533018 FUOMA2VDF0 154 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 SNTNA6NMZ2 147 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 XPNPEP2O43895 674 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 CDK2P24941 298 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 CD24P25063 80 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 ERP29P30040 261 aaKnown RBP14.31□□□□□ -0.12
PCF11-206ENST00000533018 AESQ08117 197 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 TMEM95Q3KNT9 176 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 OXLD1Q5BKU9 147 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 MEDAGQ5VYS4 303 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 OR52W1Q6IF63 320 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 BAIAP2L2Q6UXY1 529 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 OR51A4Q8NGJ6 313 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 OR10AC1Q8NH08 325 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 HRASLS5Q96KN8 279 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 C4orf36Q96KX1 117 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 MBOAT4Q96T53 435 aa14.31□□□□□ -0.12
PCF11-206ENST00000533018 IGKV1-12A0A0C4DH73 117 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 A0A1W2PRX2 142 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 TOR1AO14656 332 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 EI24O14681 340 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 IGKV1D-12P01611 117 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 ALPLP05186 524 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 TMEM225BP0DP42 221 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 BRS3P32247 399 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 GLIPR1P48060 266 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 CCR9P51686 369 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 ARHGDIBP52566 201 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 FDX2Q6P4F2 183 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 ACBD7Q8N6N7 88 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 OR4P4Q8NGL7 312 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 ZNF596Q8TC21 504 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 SGCDQ92629 289 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 MRPL48Q96GC5 212 aaKnown RBP14.3□□□□□ -0.12
PCF11-206ENST00000533018 AKR1E2Q96JD6 320 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 WNT10AQ9GZT5 417 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 DPM3Q9P2X0 92 aa14.3□□□□□ -0.12
PCF11-206ENST00000533018 J3QRE1 110 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 KDM4BO94953 1096 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 HCKP08631 526 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 SNRPGP62308 76 aaKnown RBP14.29□□□□□ -0.12
PCF11-206ENST00000533018 ALKBH1Q13686 389 aaKnown RBP14.29□□□□□ -0.12
PCF11-206ENST00000533018 KRBOX4Q5JUW0 171 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 SLC25A30Q5SVS4 291 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 KPRPQ5T749 579 aaPredicted RBP14.29□□□□□ -0.12
PCF11-206ENST00000533018 HEPN1Q6WQI6 88 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 RNF144BQ7Z419 303 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 CENPVQ7Z7K6 275 aaPredicted RBP14.29□□□□□ -0.12
PCF11-206ENST00000533018 RTN4RL2Q86UN3 420 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 LHFPL3Q86UP9 236 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 OR5AU1Q8NGC0 362 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 PELI1Q96FA3 418 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 MYCBPQ99417 103 aaPredicted RBP14.29□□□□□ -0.12
PCF11-206ENST00000533018 ZCCHC4Q9H5U6 513 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 AASSQ9UDR5 926 aa14.29□□□□□ -0.12
PCF11-206ENST00000533018 FAM90A22PA8MWA6 464 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 LEUTXA8MZ59 168 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 DEGS1O15121 323 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 PTGFRP43088 359 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 ALDH3A2P51648 485 aa14.28□□□□□ -0.12
PCF11-206ENST00000533018 RBM39Q14498 530 aaKnown RBP14.28□□□□□ -0.12
PCF11-206ENST00000533018 ATXN7L3Q14CW9 347 aaPredicted RBP14.28□□□□□ -0.12
PCF11-206ENST00000533018 OR4D6Q8NGJ1 314 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms