RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 OR12D3Q9UGF7 316 aa4.29□□□□□ -1.72
ECHDC1-222ENST00000531967 SCN4AP35499 1836 aa4.29□□□□□ -1.72
ECHDC1-222ENST00000531967 ALS2Q96Q42 1657 aa4.29□□□□□ -1.72
ECHDC1-222ENST00000531967 RALGAPA1Q6GYQ0 2036 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 A0A1B0GWB2 263 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 KRBOX1C9JBD0 128 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 MANBAO00462 879 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR7C1O76099 320 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 NUDT14O95848 222 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 CD55P08174 381 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 CD48P09326 243 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 CD37P11049 281 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 CYBAP13498 195 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 DDTP30046 118 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 S100A7P31151 101 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 SURF2Q15527 256 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 TMEM30BQ3MIR4 351 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 PARP15Q460N3 678 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OTUD1Q5VV17 481 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 GRINAQ7Z429 371 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ZBTB8OSQ8IWT0 167 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 C12orf45Q8N5I9 185 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 SUMF1Q8NBK3 374 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR51G1Q8NGK1 321 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR6N1Q8NGY5 312 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR4C3Q8NH37 302 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR4K15Q8NH41 348 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 SPPL2BQ8TCT7 592 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 URB1-AS1Q96HZ7 61 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 SSBP3Q9BWW4 388 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 TAPBPLQ9BX59 468 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 HMG20AQ9NP66 347 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 DOK5Q9P104 306 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 RGPD5Q99666 1765 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 DOCK2Q92608 1830 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF587BE7ETH6 402 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR2J2O76002 312 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ATG12O94817 140 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 TRAPPC2P0DI81 140 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 TRAPPC2BP0DI82 140 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR13C7P0DN81 318 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 FOXG1P55316 489 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 GTF2BQ00403 316 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF92Q03936 586 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 NSUN5P1Q3KNT7 163 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 LEMD1Q68G75 181 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR10K2Q6IF99 312 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 LINC00299Q6ZSB3 139 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 CARM1Q86X55 608 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 C9orf62Q8N4C0 152 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR10R2Q8NGX6 335 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 OR13C6PQ8NH95 151 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF420Q8TAQ5 688 aaPredicted RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ZFAND1Q8TCF1 268 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 TMEM54Q969K7 222 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 MAGOHBQ96A72 148 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 SARAFQ96BY9 339 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 LRRC58Q96CX6 371 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ABCG5Q9H222 651 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 RPF2Q9H7B2 306 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 KCNJ16Q9NPI9 418 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 RBM22Q9NW64 420 aaKnown RBP eCLIP4.28□□□□□ -1.727e-6■■■■□ 24.6
ECHDC1-222ENST00000531967 RAB22AQ9UL26 194 aa4.28□□□□□ -1.72
ECHDC1-222ENST00000531967 ZNF503-AS2A6NEH8 195 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 ZNF705EA8MWA4 302 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 J3QRK9 145 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 TNFSF12O43508 249 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 CHST10O43529 356 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 SNAP91O60641 907 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 GLUD1P00367 558 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 HTR1AP08908 422 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 METTL15P1P0C7V9 234 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 IL7P13232 177 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 SPINK2P20155 84 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 PSMB1P20618 241 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 S100A11P31949 105 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 REG1BP48304 166 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 PSMD8P48556 350 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 APOC4P55056 127 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 TAS2R43P59537 309 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 PKIAP61925 76 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 BAXQ07812 192 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 ZNF630Q2M218 657 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 REP15Q6BDI9 236 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 HOGA1Q86XE5 327 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 ZNF283Q8N7M2 679 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 ZFP41Q8N8Y5 198 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 OR52E2Q8NGJ4 325 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 SKA2Q8WVK7 121 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 S100ZQ8WXG8 99 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 EXTL1Q92935 676 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 VPS25Q9BRG1 176 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 GINS3Q9BRX5 216 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 SLC25A39Q9BZJ4 359 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 PLAC1Q9HBJ0 212 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 AURKAIP1Q9NWT8 199 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 THYN1Q9P016 225 aa4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 DHCR7Q9UBM7 475 aaKnown RBP4.27□□□□□ -1.73
ECHDC1-222ENST00000531967 ANGPT4Q9Y264 503 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms