RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 KCNIP4Q6PIL6 250 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 C1orf174Q8IYL3 243 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM256Q8N2U0 113 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 OR5L1Q8NGL2 311 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 KCNG3Q8TAE7 436 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM171Q8WVE6 324 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 SOCS4Q8WXH5 440 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 RELTQ969Z4 430 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 PPP1R14AQ96A00 147 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM56Q96MV1 263 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 NICN1Q9BSH3 213 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 OR51I2Q9H344 312 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 NAA60Q9H7X0 242 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TBX21Q9UL17 535 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 B9D1Q9UPM9 204 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 LRP12Q9Y561 859 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM56-RWDD3S4R434 201 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 IGHV1-69-2A0A0G2JMI3 117 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 IGSF23A1L1A6 192 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 FAM221AA4D161 298 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 OR5B21A6NL26 309 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 FAM166BA8MTA8 275 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 M0QZ24 198 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 VENTXO95231 258 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CTSBP07858 339 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 EIF3IQ13347 325 aaKnown RBP7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CD226Q15762 336 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM95Q3KNT9 176 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CXCL17Q6UXB2 119 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF761Q86XN6 746 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-214ENST00000530886 SLC38A9Q8NBW4 561 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 COX14Q96I36 57 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CCDC74BQ96LY2 380 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 MACROD1Q9BQ69 325 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 BET1LQ9NYM9 111 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 PCNX3Q9H6A9 2034 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 TMEM250H0YL14 139 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 K7ERU9 68 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 XRCC2O43543 280 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 HYPMO75409 117 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CDS2O95674 445 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 C8AP07357 584 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 CPMP14384 443 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 MLF2Q15773 248 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-214ENST00000530886 VWA1Q6PCB0 445 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 LIAT1Q6ZQX7 453 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 SLAMF6Q96DU3 332 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 LRRC3BQ96PB8 259 aa7.08□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF703Q9H7S9 590 aaPredicted RBP7.08□□□□□ -1.28
CSDE1-214ENST00000530886 ANKUB1A6NFN9 424 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 PDGFBP01127 241 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 IFNA1P01562 189 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 FAHP16930 419 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 PEBP1P30086 187 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 SNU13P55769 128 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 TCEAL5Q5H9L2 206 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 TXNDC8Q6A555 127 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 OR52N5Q8NH56 324 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF519Q8TB69 540 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 MSI2Q96DH6 328 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 ADOQ96SZ5 270 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 MANBALQ9NQG1 85 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 ELOVL5Q9NYP7 299 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 CXXC1Q9P0U4 656 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 GNG13Q9P2W3 67 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 SOCS1O15524 211 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 DUSP11O75319 330 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 REG1AP05451 166 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 SMIM10L1P0DMW3 83 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 PNMTP11086 282 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 AADACP22760 399 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 CSNK2A1P68400 391 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 ZP2Q05996 745 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 DPTQ07507 201 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 SHBQ15464 509 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 CSNK2A3Q8NEV1 391 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 OR52M1Q8NGK5 317 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 IL22RA2Q969J5 263 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 SMIM10Q96HG1 83 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 MRPL13Q9BYD1 178 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF430Q9H8G1 570 aaPredicted RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 MMP25Q9NPA2 562 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 MRPL22Q9NWU5 206 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 IL19Q9UHD0 177 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 SMPXQ9UHP9 88 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 PTRH2Q9Y3E5 179 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 IGHV2-26A0A0B4J1V2 119 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 HS3ST1O14792 307 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 H2BFMP0C1H6 154 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 GCH1P30793 250 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 HNRNPA3P51991 378 aaKnown RBP7.07□□□□□ -1.28
CSDE1-214ENST00000530886 METAP1P53582 386 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 LINC00310P59036 64 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 FOXL1Q12952 345 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 FAM53BQ14153 422 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 ODF3L1Q8IXM7 274 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 LGI3Q8N145 548 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 APH1AQ96BI3 265 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 ZNF524Q96C55 264 aa7.07□□□□□ -1.28
CSDE1-214ENST00000530886 LMF2Q9BU23 707 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms