RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 Q6ZR03 302 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 Q6ZR54 194 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 COX8CQ7Z4L0 72 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 SLC25A42Q86VD7 318 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 LRRC28Q86X40 367 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-213ENST00000530784 MICU2Q8IYU8 434 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 OR8J3Q8NGG0 315 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 OR51A7Q8NH64 312 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 ITLN1Q8WWA0 313 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 CORO2AQ92828 525 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 TOMM40LQ969M1 308 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 ATP6V1G3Q96LB4 118 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 PRRC1Q96M27 445 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 OR2V2Q96R30 315 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 ECSITQ9BQ95 431 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 SIKE1Q9BRV8 207 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 NDEL1Q9GZM8 345 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 POLE4Q9NR33 117 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 IL19Q9UHD0 177 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 IL20RAQ9UHF4 553 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 IGHV2-70DA0A0C4DH43 119 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 A0A0G2JND7 137 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 OOEPA6NGQ2 149 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 EFCAB9A8MZ26 197 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 FAM220BPB1ANY3 271 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 FXYD1O00168 92 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 FBP2O00757 339 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 XKRYO14609 159 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 MRASO14807 208 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 SGCEO43556 437 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 SELENOFO60613 162 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 PPIAL4GP0DN37 164 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 MDKP21741 143 aaPredicted RBP5.29□□□□□ -1.56
CSDE1-213ENST00000530784 CD80P33681 288 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 RPL4P36578 427 aaKnown RBP5.29□□□□□ -1.56
CSDE1-213ENST00000530784 NPBWR1P48145 328 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 RGS6P49758 472 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 ERFP50548 548 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 GNB2P62879 340 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 AQP6Q13520 282 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 TRAM2Q15035 370 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 SLC9A3R2Q15599 337 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 ANKDD1AQ495B1 522 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 CYBRD1Q53TN4 286 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 COQ5Q5HYK3 327 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 METTL21CQ5VZV1 264 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 SLC27A4Q6P1M0 643 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 C1orf94Q6P1W5 598 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 C11orf88Q6PI97 169 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 LRRN1Q6UXK5 716 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 C5orf24Q7Z6I8 188 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 OAFQ86UD1 273 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 CALHM3Q86XJ0 350 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 NRMQ8IXM6 262 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 OFCC1Q8IZS5 231 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 OR5AS1Q8N127 324 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 OR8H3Q8N146 312 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 LRRC75AQ8NAA5 344 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 OR10AD1Q8NGE0 317 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 OR13C2Q8NGS9 318 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 UPRTQ96BW1 309 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 HAVCR1Q96D42 359 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 CMBLQ96DG6 245 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 TPD52L3Q96J77 140 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 PLEKHA8Q96JA3 519 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 MAGEB18Q96M61 343 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 SLITRK2Q9H156 845 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 STARD10Q9Y365 291 aa5.29□□□□□ -1.56
CSDE1-213ENST00000530784 MDFIC2A0A1B0GVS7 189 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 LRRC30A6NM36 301 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 BBIP1A8MTZ0 92 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 E5RGE8 158 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 EDF1O60869 148 aaKnown RBP5.28□□□□□ -1.56
CSDE1-213ENST00000530784 MTRF1O75570 445 aaKnown RBP5.28□□□□□ -1.56
CSDE1-213ENST00000530784 CYB5R3P00387 301 aaPredicted RBP5.28□□□□□ -1.56
CSDE1-213ENST00000530784 NPPAP01160 153 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 IFNW1P05000 195 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 CD14P08571 375 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 WNT2P09544 360 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 KDELR2P33947 212 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 GPR4P46093 362 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 PITPNBP48739 271 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 SRP9P49458 86 aaKnown RBP5.28□□□□□ -1.56
CSDE1-213ENST00000530784 SELENOWP63302 87 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 PAX2Q02962 417 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 PRKCDQ05655 676 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 KRR1Q13601 381 aaKnown RBP5.28□□□□□ -1.56
CSDE1-213ENST00000530784 MAPRE2Q15555 327 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 TTMPQ5BVD1 217 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 MESTQ5EB52 335 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 FBXW12Q6X9E4 464 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 ZNF730Q6ZMV8 503 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 C17orf107Q6ZR85 190 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 MBOAT2Q6ZWT7 520 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 NKAIN3Q8N8D7 197 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 OR8G5Q8NG78 346 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 OR8B3Q8NGG8 313 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 OR5L1Q8NGL2 311 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 OR13G1Q8NGZ3 307 aa5.28□□□□□ -1.56
CSDE1-213ENST00000530784 OR1F12Q8NHA8 337 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms