RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 OR1B1Q8NGR6 318 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 PHYHIPLQ96FC7 376 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 KCNK15Q9H427 330 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 PCOLCE2Q9UKZ9 415 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 SHANK3Q9BYB0 1731 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 COL11A2P13942 1736 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 MPC2O95563 127 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 PATE4P0C8F1 98 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 RPL13AP40429 203 aaKnown RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 ETFDHQ16134 617 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 CLEC12BQ2HXU8 276 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF721Q8TF20 911 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 APOBEC4Q8WW27 367 aaKnown RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF665Q9H7R5 613 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 IL36GQ9NZH8 169 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 TO15178 435 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 TOX4O94842 621 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 KIR2DL1P43626 348 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 PSG6Q00889 435 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 PAX5Q02548 391 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 OR4D11Q8NGI4 311 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF71Q9NQZ8 489 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 COA4Q9NYJ1 87 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 RNF7Q9UBF6 113 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 LIFP15018 202 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 TFF2Q03403 129 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 Q1RN00 199 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 C8orf82Q6P1X6 216 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 SPNS3Q6ZMD2 512 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 ETV3LQ6ZN32 361 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 SLC25A40Q8TBP6 338 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 SP7Q8TDD2 431 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 GMPPAQ96IJ6 420 aaPredicted RBP7.48□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF426Q9BUY5 554 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 LPAR3Q9UBY5 353 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 KCNMB2Q9Y691 235 aa7.48□□□□□ -1.21
CTNND1-227ENST00000530748 OR4A8P0C604 315 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 SELENOPP49908 381 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 RNF212Q495C1 297 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 SLC25A30Q5SVS4 291 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 LIAT1Q6ZQX7 453 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 SMRP1Q8NCR6 262 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 OR1L1Q8NH94 360 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 VSTM2AQ8TAG5 236 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 ZNF107Q9UII5 783 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-227ENST00000530748 LGALS7P47929 136 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 COL13A1Q5TAT6 717 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-227ENST00000530748 OR2C3Q8N628 320 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 GVQW1Q8N7I0 195 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 RFESDQ8TAC1 157 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 RASL11BQ9BPW5 248 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 PARD6AQ9NPB6 346 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 WNK3Q9BYP7 1800 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 OR2M5A3KFT3 312 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 HMSDA8MTL9 139 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 RGS13O14921 159 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 HYAL3O43820 417 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-227ENST00000530748 PMCHP20382 165 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 ZXDAP98168 799 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 MOGAT3Q86VF5 341 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 SFTPA2Q8IWL1 248 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 C9orf40Q8IXQ3 194 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 SLC52A3Q9NQ40 469 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 TMEM38BQ9NVV0 291 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 MBD1Q9UIS9 605 aaPredicted RBP7.47□□□□□ -1.21
CTNND1-227ENST00000530748 TCRBV16S1A1N1A0A5B0 115 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 GYPAP02724 150 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 FOXO1Q12778 655 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 ANGPTL6Q8NI99 470 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 VAMP8Q9BV40 100 aa7.47□□□□□ -1.21
CTNND1-227ENST00000530748 TMPRSS2O15393 492 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.21
CTNND1-227ENST00000530748 CCL3P10147 92 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 CSF2RBP32927 897 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 HLA-DRB3P79483 266 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 MRPS11P82912 194 aaKnown RBP7.46□□□□□ -1.21
CTNND1-227ENST00000530748 C1orf185Q5T7R7 199 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 WDR73Q6P4I2 378 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 CFHR5Q9BXR6 569 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 SLC35B3Q9H1N7 401 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 TMEM167BQ9NRX6 74 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 NTMQ9P121 344 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 NAGKQ9UJ70 344 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 GEMIN2O14893 280 aaKnown RBP7.46□□□□□ -1.21
CTNND1-227ENST00000530748 SPINT1O43278 529 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 ACP1P24666 158 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 GGTLC2Q14390 218 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 RNF151Q2KHN1 245 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 TMEM88Q6PEY1 159 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 INO80CQ6PI98 192 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-227ENST00000530748 PDPNQ86YL7 162 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 NFAM1Q8NET5 270 aaPredicted RBP7.46□□□□□ -1.21
CTNND1-227ENST00000530748 HSD17B10Q99714 261 aaKnown RBP7.46□□□□□ -1.21
CTNND1-227ENST00000530748 NRTNQ99748 197 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 DOK5Q9P104 306 aa7.46□□□□□ -1.21
CTNND1-227ENST00000530748 TEX50A0A1B0GTY4 177 aa7.46□□□□□ -1.22
CTNND1-227ENST00000530748 NPIPB8E9PQR5 432 aa7.46□□□□□ -1.22
CTNND1-227ENST00000530748 RPL36A-HNRNPH2H7BZ11 118 aa7.46□□□□□ -1.22
CTNND1-227ENST00000530748 F2RL2O00254 374 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms