RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CCDC190Q86UF4 302 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 MUC20Q8N307 709 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 ANGPTL6Q8NI99 470 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 LURAP1Q96LR2 239 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 NUDT16L1Q9BRJ7 211 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 IFT22Q9H7X7 185 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 ZNF222Q9UK12 451 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 HECTD1Q9ULT8 2610 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 TRAV18A0A075B6X5 111 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 FABP12A6NFH5 140 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 FOXI3A8MTJ6 420 aaPredicted RBP13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 FSTL3O95633 263 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 IGHV2-70P01814 119 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 TFF1P04155 84 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 CSF3P09919 207 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 FUT3P21217 361 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 CHATP28329 748 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 TAS2R20P59543 309 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 IL18Q14116 193 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 CLEC2AQ6UVW9 174 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 FAM131AQ6UXB0 335 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 Q6ZTK2 550 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 CD177Q8N6Q3 437 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 NINJ1Q92982 152 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 ARHGAP5-AS1Q96IT6 56 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 PLEKHJ1Q9NW61 149 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 RCC2Q9P258 522 aaKnown RBP13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 MRPS7Q9Y2R9 242 aaKnown RBP13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 UNC79Q9P2D8 2635 aa13.25□□□□□ -0.29
TSPAN4-213ENST00000524895 ABCA12Q86UK0 2595 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 SLC33A1O00400 549 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 HSPB6O14558 160 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 HIST1H1DP16402 221 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 MNDAP41218 407 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 NR4A2P43354 598 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 COL10A1Q03692 680 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 ARL6IP1Q15041 203 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 PAN3Q58A45 887 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 PLAC9Q5JTB6 97 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 SIGIRRQ6IA17 410 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 C6orf201Q7Z4U5 140 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 ASCC1Q8N9N2 400 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 SUMF2Q8NBJ7 301 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 NEK7Q8TDX7 302 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 FAM168AQ92567 244 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 MBD6Q96DN6 1003 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 TSC22D3Q99576 134 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 CCL13Q99616 98 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 TMEM246Q9BRR3 403 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 PIMREGQ9BSJ6 248 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 DPCDQ9BVM2 203 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 PECRQ9BY49 303 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 DNTTIP1Q9H147 329 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 ZNF665Q9H7R5 613 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 ZMAT3Q9HA38 289 aaKnown RBP13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 SEBOXQ9HB31 216 aaPredicted RBP13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 TMEM165Q9HC07 324 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 HSF4Q9ULV5 492 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 AKAP6Q13023 2319 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 USF3Q68DE3 2245 aa13.24□□□□□ -0.29
TSPAN4-213ENST00000524895 APCP25054 2843 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 A0A0G2JMP0 313 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 A0A0X1KG70 313 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 MCRIP1C9JLW8 97 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 NDUFS8O00217 210 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 TMPRSS2O15393 492 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 NDUFA2O43678 99 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 GNB3P16520 340 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 GIFP27352 417 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 ETV6P41212 452 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 TMEM50BP56557 158 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 IL13RA1P78552 427 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 LSAMPQ13449 338 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 RBM39Q14498 530 aaKnown RBP13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 CDNFQ49AH0 187 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 BRICD5Q6PL45 260 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 ZNF788Q6ZQV5 615 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 DCDC5Q6ZRR9 648 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 SLC36A1Q7Z2H8 476 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 RTN4RL2Q86UN3 420 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 SNX29P2Q8IUI4 249 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 LRRC75A-AS1Q8N1F1 130 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 ZNF561Q8N587 486 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 SPICQ8N5J4 248 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 OR4M2Q8NGB6 313 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 C15orf40Q8WUR7 153 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 SDSLQ96GA7 329 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 GAFA1Q96PS6 74 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 RABL2AQ9UBK7 228 aaPredicted RBP13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 RABL2BQ9UNT1 228 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 V9GYH0 126 aa13.23□□□□□ -0.29
TSPAN4-213ENST00000524895 TMEM235A6NFC5 223 aa13.22□□□□□ -0.29
TSPAN4-213ENST00000524895 MFNGO00587 321 aa13.22□□□□□ -0.29
TSPAN4-213ENST00000524895 SIGLEC5O15389 551 aa13.22□□□□□ -0.29
TSPAN4-213ENST00000524895 ADAM20O43506 726 aa13.22□□□□□ -0.29
TSPAN4-213ENST00000524895 GLAP06280 429 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms