RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 H0YL77 283 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 MLNRO43193 412 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 MPZL2O60487 215 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PAGE4O60829 102 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 LY6HO94772 140 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 RPP14O95059 124 aaKnown RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 TTRP02766 147 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 H2BFMP0C1H6 154 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 CCDC159P0C7I6 412 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR2T7P0C7T2 308 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 SMIM18P0DKX4 95 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 COX6B1P14854 86 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF250P15622 560 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 SELEP16581 610 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PTAFRP25105 342 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ACKR3P25106 362 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 APLNRP35414 380 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ALDH3B1P43353 468 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 HSPA13P48723 471 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 MMP15P51511 669 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 BLVRAP53004 296 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 UCP2P55851 309 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF121P58317 390 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PCBD1P61457 104 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PPP1CBP62140 327 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 RPS11P62280 158 aaKnown RBP eCLIP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 FAM3AP98173 230 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF92Q03936 586 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 RAB40BQ12829 278 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PSG7Q13046 419 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 SNTB2Q13425 540 aaKnown RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 GK2Q14410 553 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 INSL4Q14641 139 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 TBC1D28Q2M2D7 210 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ODF4Q2M2E3 257 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 FFAR4Q5NUL3 377 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 LIPNQ5VXI9 398 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 KRT77Q7Z794 578 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 CATSPERDQ86XM0 798 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 CCDC36Q8IYA8 594 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 RDH10Q8IZV5 341 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR5AS1Q8N127 324 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ZNF786Q8N393 782 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 GCSAMQ8N6F7 178 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ACBD7Q8N6N7 88 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ZFP41Q8N8Y5 198 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 NUP37Q8NFH4 326 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR10H4Q8NGA5 316 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR51A4Q8NGJ6 313 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR1J1Q8NGS3 322 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR13C5Q8NGS8 318 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR2AJ1Q8NGZ0 328 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR2T27Q8NH04 317 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 KLF14Q8TD94 323 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 MRGPRDQ8TDS7 321 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 SPRYD4Q8WW59 207 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 SGK3Q96BR1 496 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 TMEM80Q96HE8 168 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PGLYRP3Q96LB9 341 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OR5M11Q96RB7 305 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 DOK1Q99704 481 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 DHRS9Q9BPW9 319 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PDCD1LG2Q9BQ51 273 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 COPS4Q9BT78 406 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 TRAF4Q9BUZ4 470 aaPredicted RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 TEX12Q9BXU0 123 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PBOV1Q9GZY1 135 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 HDHD2Q9H0R4 259 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 VCXQ9H320 206 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 VCX3BQ9H321 246 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 CA10Q9NS85 328 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PTTG3PQ9NZH4 202 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 CNOT2Q9NZN8 540 aaKnown RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 ATPIF1Q9UII2 106 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 LAMP5Q9UJQ1 280 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 IKZF2Q9UKS7 526 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 POLR1DQ9Y2S0 133 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 RPL36Q9Y3U8 105 aaKnown RBP2.43□□□□□ -2.02
CSDE1-208ENST00000524652 R4GMQ9 66 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.43□□□□□ -2.022e-6■■■□□ 16.8
CSDE1-208ENST00000524652 ACANP16112 2415 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
CSDE1-208ENST00000524652 CSPG4Q6UVK1 2322 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 IGHV3-64DA0A0J9YX35 117 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 PNMA8CA0A1B0GUJ8 204 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 TMEM269A0A1B0GVZ9 245 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 LOC107986453A0A1B0GWG9 222 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 A0A1B0GWJ7 208 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 DAPL1A0PJW8 107 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 EFCAB10A6NFE3 127 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ANKRD61A6NGH8 418 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 METTL15A6NJ78 407 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 ZSCAN5BA6NJL1 495 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 TRIM64CA6NLI5 447 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 OR4C45A6NMZ5 311 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 IQCF6A8MYZ5 107 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 LOC110117498-PIK3R3F6TDL0 507 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 LYNX1G3V0Z9 82 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 J3QLW9 94 aa2.42□□□□□ -2.02
CSDE1-208ENST00000524652 CASKO14936 926 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms