RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HDHD2Q9H0R4 259 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 Q9H521 79 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF442Q9H7R0 627 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 NIPAL2Q9H841 368 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 Q9H8V8 135 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SP140LQ9H930 580 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ELOVL3Q9HB03 270 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 AMBNQ9NP70 447 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 FGF20Q9NP95 211 aaPredicted RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 TUBG2Q9NRH3 451 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 INPP5EQ9NRR6 644 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 DDX28Q9NUL7 540 aaKnown RBP2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SCN3BQ9NY72 215 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 PSORS1C1Q9UIG5 152 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ATPIF1Q9UII2 106 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 LAMP5Q9UJQ1 280 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 COPS3Q9UNS2 423 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 KLHDC2Q9Y2U9 406 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 LRRC42Q9Y546 428 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 SELENOKQ9Y6D0 94 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM14AQ9Y6G1 99 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 NCKAP5O14513 1909 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 WDFY3Q8IZQ1 3526 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZFYVE26Q68DK2 2539 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF462Q96JM2 2506 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 PIEZO2Q9H5I5 2752 aa2.61□□□□□ -1.99
VPS13B-209ENST00000521559 MED12Q93074 2177 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 EML6Q6ZMW3 1958 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF407Q9C0G0 2248 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 HEATR5AQ86XA9 2040 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 PCNX3Q9H6A9 2034 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 A0A1W2PPR1 153 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 A0A1W2PQL4 384 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM129A0AVI4 362 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 DAPL1A0PJW8 107 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 A4D1N5 150 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 EFCAB10A6NFE3 127 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 METTL15A6NJ78 407 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ACOD1A6NK06 481 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF878C9JN71 531 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ATP6V1G2-DDX39BF2Z307 99 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 F5H5K5 113 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 H3BSA7 217 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SMPD2O60906 423 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 FCGR3BO75015 233 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SULT1C4O75897 302 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 KRT8P05787 483 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 LYNP07948 512 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 TACSTD2P09758 323 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 H2BFMP0C1H6 154 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 OR4A8P0C604 315 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 CCDC159P0C7I6 412 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 PIPP12273 146 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 CCNOP22674 350 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 DCKP27707 260 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 OTX1P32242 354 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 RPS27P42677 84 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 CDX1P47902 265 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 EVX1P49640 407 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 RGS6P49758 472 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 PRKXP51817 358 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 RIDAP52758 137 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM50BP56557 158 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF121P58317 390 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 PPP1CBP62140 327 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 RPS23P62266 143 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ACTC1P68032 377 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ACTA1P68133 377 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 GALK2Q01415 458 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SNTB2Q13425 540 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 MED21Q13503 144 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 LBHQ53QV2 105 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 RBM48Q5RL73 367 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF684Q5T5D7 378 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 AGAP6Q5VW22 663 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF544Q6NX49 715 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 LRRN1Q6UXK5 716 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 PLEKHG7Q6ZR37 379 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SSX6Q7RTT6 188 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 NAA40Q86UY6 237 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF679Q8IYX0 411 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ZNF283Q8N7M2 679 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 UXS1Q8NBZ7 420 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 BPIFB6Q8NFQ5 453 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 OR5T2Q8NGG2 359 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 OR5L1Q8NGL2 311 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SLC25A40Q8TBP6 338 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SMAP2Q8WU79 429 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SLC7A6Q92536 515 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 RASL10AQ92737 203 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 MYDGFQ969H8 173 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 ITFG2Q969R8 447 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 APOBEC3DQ96AK3 386 aaPredicted RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 SGK3Q96BR1 496 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 HAVCR1Q96D42 359 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 CMBLQ96DG6 245 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 MRPL48Q96GC5 212 aaKnown RBP2.6□□□□□ -1.99
VPS13B-209ENST00000521559 TMEM80Q96HE8 168 aa2.6□□□□□ -1.99
VPS13B-209ENST00000521559 CNBD2Q96M20 576 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms