RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 PPP1R35Q8TAP8 253 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 SMIM4Q8WVI0 70 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 TIMD4Q96H15 378 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 ABHD1Q96SE0 405 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PECRQ9BY49 303 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 ZMAT3Q9HA38 289 aaKnown RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 SCPEP1Q9HB40 452 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 MYOZ1Q9NP98 299 aaPredicted RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 DCAF16Q9NXF7 216 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 RCC2Q9P258 522 aaKnown RBP7.52□□□□□ -1.21
CSMD1-208ENST00000520561 EDARQ9UNE0 448 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 PPIAL4AQ9Y536 164 aa7.52□□□□□ -1.21
CSMD1-208ENST00000520561 ROS1P08922 2347 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CHD3Q12873 2000 aaKnown RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 OVOL3O00110 214 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 HSPB6O14558 160 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 GSTZ1O43708 216 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CA11O75493 328 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 RP2O75695 350 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 UPK1BO75841 260 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 GLAP06280 429 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 LPLP06858 475 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 PSG2P11465 335 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 PTHLHP12272 177 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 MDH2P40926 338 aaKnown RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CBX5P45973 191 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 KCNJ3P48549 501 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CEBPDP49716 269 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 TMEM50BP56557 158 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ACTBP60709 375 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 BTG1P62324 171 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ACTG1P63261 375 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 DGCR2P98153 550 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 HOXA4Q00056 320 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 DCTN2Q13561 401 aaKnown RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 HACD4Q5VWC8 232 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 SHEQ5VZ18 495 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 STUMQ69YW2 141 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 Q6P435 159 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 TRAPPC6BQ86SZ2 158 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 MUC20Q8N307 709 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ASCC1Q8N9N2 400 aaKnown RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 SUMF2Q8NBJ7 301 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 DEFB108BQ8NET1 73 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 NUDCD2Q8WVJ2 157 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 FCAMRQ8WWV6 532 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ST8SIA4Q92187 359 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 YIPF5Q969M3 257 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 SEH1LQ96EE3 360 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CMSS1Q9BQ75 279 aaKnown RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 SULT4A1Q9BR01 284 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 DPCDQ9BVM2 203 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ZNF665Q9H7R5 613 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CHODLQ9H9P2 273 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 SEBOXQ9HB31 216 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 BARX1Q9HBU1 254 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CHMP1AQ9HD42 196 aaPredicted RBP7.51□□□□□ -1.21
CSMD1-208ENST00000520561 PALMDQ9NP74 551 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 C12orf4Q9NQ89 552 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 IFT46Q9NQC8 304 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ABCB10Q9NRK6 738 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ETAA1Q9NY74 926 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ZNF581Q9P0T4 197 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ABCA4P78363 2273 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 CACNA1DQ01668 2161 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 ARFGEF3Q5TH69 2177 aa7.51□□□□□ -1.21
CSMD1-208ENST00000520561 LRRK2Q5S007 2527 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 IGKV1D-17A0A075B6S4 117 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 TRAV24A0A0B4J272 114 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 UBE2QL1A1L167 161 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 ISPDA4D126 451 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 LYNX1G3V0Z9 82 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 SLC33A1O00400 549 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-208ENST00000520561 PPIHO43447 177 aaKnown RBP7.5□□□□□ -1.21
CSMD1-208ENST00000520561 RBBP9O75884 186 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 LY6HO94772 140 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 ZNF205O95201 554 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 F12P00748 615 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-208ENST00000520561 GYPAP02724 150 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 MELTFP08582 738 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 LYNX1P0DP58 116 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 IL7P13232 177 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 PRDX2P32119 198 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 RCVRNP35243 200 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 GDNFP39905 211 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 GUCA2AQ02747 115 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 COL10A1Q03692 680 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 OLFML2AQ68BL7 652 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 SLC36A1Q7Z2H8 476 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 RTN4RL2Q86UN3 420 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 ZNF561Q8N587 486 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 OR5T2Q8NGG2 359 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 OR52I2Q8NH67 350 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 ANGPTL6Q8NI99 470 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 GPX8Q8TED1 209 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 IGFBPL1Q8WX77 278 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 RAB1CQ92928 201 aa7.5□□□□□ -1.21
CSMD1-208ENST00000520561 SDHCQ99643 169 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms