RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 C5orf24Q7Z6I8 188 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 MOB3AQ96BX8 217 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 HIST1H2AAQ96QV6 131 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 SHARPINQ9H0F6 387 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 OPA3Q9H6K4 179 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 SHANK1Q9Y566 2161 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 A0A1B0GW55 424 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 DUX4L2P0CJ85 424 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 DUX4L3P0CJ86 424 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 DUX4L4P0CJ87 422 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 DUX4L5P0CJ88 424 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 DUX4L6P0CJ89 424 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 DUX4L7P0CJ90 424 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 PET100P0DJ07 73 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 TPT1P13693 172 aaKnown RBP22.06■■□□□ 1.12
COL13A1-213ENST00000520267 AADACP22760 399 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 TMEM187Q14656 261 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 IGSF11Q5DX21 431 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 OR5P3Q8WZ94 311 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 COQ3Q9NZJ6 369 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 DUX4Q9UBX2 424 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 KCNIP3Q9Y2W7 256 aa22.06■■□□□ 1.12
COL13A1-213ENST00000520267 KRBOX1C9JBD0 128 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 MKXQ8IYA7 352 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 GALNT11Q8NCW6 608 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 SLC2A9Q9NRM0 540 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 TRAPPC2LH3BP13 241 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 GLP1RP43220 463 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 BAP18Q8IXM2 172 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 STPG2Q8N412 459 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 SLC30A7Q8NEW0 376 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 OR11L1Q8NGX0 322 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 GALNT14Q96FL9 552 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 CNTNAP3BQ96NU0 1288 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 CNTNAP3Q9BZ76 1288 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 DNAJB11Q9UBS4 358 aa22.05■■□□□ 1.12
COL13A1-213ENST00000520267 CACNA1HO95180 2353 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 IFNA21P01568 189 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 NAAAQ02083 359 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 HAGHLQ6PII5 290 aaPredicted RBP22.04■■□□□ 1.12
COL13A1-213ENST00000520267 DPPA2Q7Z7J5 298 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 FDCSPQ8NFU4 85 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 NANOS1Q8WY41 292 aaKnown RBP22.04■■□□□ 1.12
COL13A1-213ENST00000520267 ZNF175Q9Y473 711 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 ANKRD30BLA7E2S9 258 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 GLI4P10075 376 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 M6PRP20645 277 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 DUSP1P28562 367 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 UCP3P55916 312 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 ZNF488Q96MN9 340 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 SLC5A7Q9GZV3 580 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 GP6Q9HCN6 339 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 ASCL3Q9NQ33 180 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 RCC2Q9P258 522 aaKnown RBP22.04■■□□□ 1.12
COL13A1-213ENST00000520267 TUBD1Q9UJT1 453 aa22.04■■□□□ 1.12
COL13A1-213ENST00000520267 ESPL1Q14674 2120 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 SPATA46Q5T0L3 261 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 OR2T2Q6IF00 324 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 ZNF585AQ6P3V2 769 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 P4HA3Q7Z4N8 544 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 OR5T2Q8NGG2 359 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 OR5L1Q8NGL2 311 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 DNTTIP1Q9H147 329 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 HSPB6O14558 160 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 WISP2O76076 250 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 WT1P19544 449 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-213ENST00000520267 IL32P24001 234 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 IGFBP7Q16270 282 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 TFAP2EQ6VUC0 442 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 MYPOPQ86VE0 399 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-213ENST00000520267 SLC38A6Q8IZM9 456 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 GMPPAQ96IJ6 420 aaPredicted RBP22.03■■□□□ 1.12
COL13A1-213ENST00000520267 RSRP1Q9BUV0 290 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 Q9N2K0 584 aa22.03■■□□□ 1.12
COL13A1-213ENST00000520267 C3orf80F5H4A9 247 aa22.02■■□□□ 1.12
COL13A1-213ENST00000520267 PPYP01298 95 aa22.02■■□□□ 1.12
COL13A1-213ENST00000520267 HERV-K104P61576 105 aa22.02■■□□□ 1.12
COL13A1-213ENST00000520267 TAS2R3Q9NYW6 316 aa22.02■■□□□ 1.12
COL13A1-213ENST00000520267 MPC1Q9Y5U8 109 aa22.02■■□□□ 1.12
COL13A1-213ENST00000520267 URB1O60287 2271 aaKnown RBP22.01■■□□□ 1.11
COL13A1-213ENST00000520267 NAPSAO96009 420 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 HKR1P10072 659 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 PRKACAP17612 351 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 MPV17LQ2QL34 196 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 A0A1W2PR80 420 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 FGF16O43320 207 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 CELA3BP08861 270 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 TSC22D1Q15714 1073 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 Q6ZS49 121 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 LYZL2Q7Z4W2 148 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 GCNT2Q8N0V5 402 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.01■■□□□ 1.11
COL13A1-213ENST00000520267 BOLLQ8N9W6 283 aaKnown RBP22.01■■□□□ 1.11
COL13A1-213ENST00000520267 SUCNR1Q9BXA5 334 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 PLSCR2Q9NRY7 297 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 TTC28Q96AY4 2481 aa22.01■■□□□ 1.11
COL13A1-213ENST00000520267 B8ZZF3 427 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 PRSS44E7EML9 344 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 CA6P23280 308 aa22■■□□□ 1.11
COL13A1-213ENST00000520267 OR2A2Q6IF42 318 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms