RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MRM2Q9UI43 246 aaKnown RBP11.61□□□□□ -0.55
TCOF1-213ENST00000514442 LIPGQ9Y5X9 500 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF320A2RRD8 509 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 H3BMH7 237 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 SOX15O60248 233 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 PIGPP57054 158 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 EFNB1P98172 346 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF468Q5VIY5 522 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-213ENST00000514442 ZDHHC23Q8IYP9 409 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 CORO2AQ92828 525 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 ELOVL1Q9BW60 279 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 FRRS1LQ9P0K9 344 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 CES1P1Q9UKY3 287 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 TCFL5Q9UL49 500 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 TRAPPC1Q9Y5R8 145 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 LOC390937A0A1W2PQ73 354 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 G3V3Q6 166 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 SCGB2A1O75556 95 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 ZBTB25P24278 435 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 PDCD1Q15116 288 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 NR2C2APQ86WQ0 139 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 THNSL2Q86YJ6 484 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 OR2Y1Q8NGV0 311 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 OR2AE1Q8NHA4 323 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 OR1F12Q8NHA8 337 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 WFDC6Q9BQY6 131 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 A0A1W2PPV4 95 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 DBX1A6NMT0 343 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 MT-CO2P00403 227 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 CT45A8P0DMV1 189 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 CT45A9P0DMV2 189 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 PRSS53Q2L4Q9 553 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 CT45A2Q5DJT8 189 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 RPS4Y2Q8TD47 263 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF732B4DXR9 585 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 ELLP55199 621 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-213ENST00000514442 ARHGEF39Q8N4T4 335 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF808Q8N4W9 903 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-213ENST00000514442 OR4A16Q8NH70 328 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 PPP1R14DQ9NXH3 145 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 PRR13Q9NZ81 148 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 ST3GAL6Q9Y274 331 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 TRAV8-7A0A075B6U6 113 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 LRRC30A6NM36 301 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 AQP7O14520 342 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 SELEP16581 610 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 FAM3AP98173 230 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 FUT7Q11130 342 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF774Q6NX45 483 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-213ENST00000514442 C9orf40Q8IXQ3 194 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 TRAV14DV4A0A0A6YYC5 116 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 GPM6AP51674 278 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 OR4F5Q8NH21 305 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 OR4F4Q96R69 305 aa11.6□□□□□ -0.55
TCOF1-213ENST00000514442 SIAH2O43255 324 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 ATG4DQ86TL0 474 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 POLDIP2Q9Y2S7 368 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 TRAV17A0A0B4J275 112 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 KIR2DS1A0A191URI9 304 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 TOX4O94842 621 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 CCL2P13500 99 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 KIR2DS4P43632 304 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 KRTDAPP60985 99 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 KIR2DS1Q14954 304 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 C3AR1Q16581 482 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 TMPRSS7Q7RTY8 843 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 RFLNBQ8N5W9 214 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 OR10AD1Q8NGE0 317 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 SARGQ9BW04 601 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 TUBA4BQ9H853 241 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 ZDHHC8Q9ULC8 765 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 PPP1R3CQ9UQK1 317 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 SPAARA0A1B0GVQ0 90 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 LNP1A1A4G5 178 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 COLCA2A8K830 154 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 RTN4IP1Q8WWV3 396 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 ZDHHC11Q9H8X9 412 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 UNC13CQ8NB66 2214 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 WDR1O75083 606 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 GAPDHP04406 335 aaKnown RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 HIST1H1BP16401 226 aaKnown RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 GPX4P36969 197 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 ASCL1P50553 236 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 IL13RA2Q14627 380 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 PDLIM3Q53GG5 364 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 MESTQ5EB52 335 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 TMEM268Q5VZI3 342 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 CXorf67Q86X51 503 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF573Q86YE8 665 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF439Q8NDP4 499 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 TMEM100Q9NV29 134 aa11.59□□□□□ -0.55
TCOF1-213ENST00000514442 C17orf112F2Z3M2 114 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 HLA-DOBP13765 273 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 ZXDCQ2QGD7 858 aaPredicted RBP11.58□□□□□ -0.55
TCOF1-213ENST00000514442 COL5A1-AS1Q5SY13 56 aa11.58□□□□□ -0.55
TCOF1-213ENST00000514442 PMS2CLQ68D20 193 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms