RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 SDSLQ96GA7 329 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 MED30Q96HR3 178 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 COX4I2Q96KJ9 171 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 GAFA1Q96PS6 74 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 MRI1Q9BV20 369 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM59Q9BXS4 323 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 DCSTAMPQ9H295 470 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 LIN7BQ9HAP6 207 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 IL36RNQ9UBH0 155 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 CTSZQ9UBR2 303 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 ST3GAL6Q9Y274 331 aa6.32□□□□□ -1.4
HMGXB3-204ENST00000513318 A0A1W2PP11 408 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A10PA6NDY2 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A18PA6NE21 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A16PA6NEW6 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CCDC160A6NGH7 325 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A20PA6NIJ5 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A8PA6NJQ4 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A7PA6NKC0 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A22PA8MWA6 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM14DPA8MWL7 114 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A12PA8MX19 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A5PA8MXJ8 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 A8MXK9 166 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A23PA8MXZ1 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 SH2D1BO14796 132 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 LDLRAD4O15165 306 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FOXH1O75593 365 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CRTAPO75718 401 aaPredicted RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 MPIG6BO95866 241 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CHRM2P08172 466 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 WNT2P09544 360 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CLEC2LP0C7M8 214 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A15PP0C7V4 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A13PP0C7W8 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A14PP0C7W9 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM90A24PP0C7X0 464 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CALCBP10092 127 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 SLC2A2P11168 524 aaPredicted RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF44P15621 663 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 IL2RGP31785 369 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 PRDX2P32119 198 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CEBPDP49716 269 aaPredicted RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 GZMKP49863 264 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CAV3P56539 151 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CLDN12P56749 244 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 SCAND1P57086 179 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 GNB2P62879 340 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 IKZF1Q13422 519 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 UNC119Q13432 240 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 P2RY14Q15391 338 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM189A2Q15884 450 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM249Q2WGJ8 235 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 PIGYQ3MUY2 71 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 LRRC10Q5BKY1 277 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM216BQ8N7L0 139 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 ASCC1Q8N9N2 400 aaKnown RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CHST4Q8NCG5 386 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM104Q8NE00 496 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM185AQ8NFB2 350 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 OR51D1Q8NGF3 324 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 PPP1R35Q8TAP8 253 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM46BQ96A09 425 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 SLC25A46Q96AG3 418 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM3DQ96BQ1 224 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 ISOC1Q96CN7 298 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 C18orf12Q96KH6 178 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 Q96M66 194 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CCL13Q99616 98 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 SSBP3Q9BWW4 388 aaPredicted RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM234AQ9H0X4 552 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 RBM38Q9H0Z9 239 aaKnown RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 KCNK15Q9H427 330 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 SLC25A10Q9UBX3 287 aaPredicted RBP6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 FBLN5Q9UBX5 448 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 CLN8Q9UBY8 286 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 DAPK2Q9UIK4 370 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 MAB21L2Q9Y586 359 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 ZANQ9Y493 2812 aa6.31□□□□□ -1.4
HMGXB3-204ENST00000513318 TMEM272A0A1B0GTI8 110 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 SMIM31A0A1B0GVY4 71 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 A0A1B0GW55 424 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 B4DSR2 109 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 FAM157AC9JC47 383 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 H3BMQ9 156 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 H3BUI4 141 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF701M0R085 212 aaPredicted RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DVL1O14640 695 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 GEMIN2O14893 280 aaKnown RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 NDUFB3O43676 98 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 ZNF737O75373 536 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 OR7C1O76099 320 aaPredicted RBP6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 OR2H2O95918 312 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 INHBBP09529 407 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUX4L2P0CJ85 424 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUX4L3P0CJ86 424 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUX4L4P0CJ87 422 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUX4L5P0CJ88 424 aa6.3□□□□□ -1.4
HMGXB3-204ENST00000513318 DUX4L6P0CJ89 424 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms