RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SBK3P0C264 359 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR13C7P0DN81 318 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 RPS4Y1P22090 263 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 RPL12P30050 165 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 HRH1P35367 487 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PPP1CCP36873 323 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 LTBRP36941 435 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 GP2P55259 537 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 YBX1P67809 324 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 CCL8P80075 99 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ECSCRQ19T08 205 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZXDCQ2QGD7 858 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 DGAT2L6Q6ZPD8 337 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PPP1R32Q7Z5V6 425 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 LAX1Q8IWV1 398 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SVBPQ8N300 66 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZBTB44Q8NCP5 570 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 STXBP6Q8NFX7 210 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 GPR32P1Q8NGA4 272 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR8B12Q8NGG6 310 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR4C13Q8NGP0 309 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 R3HDM4Q96D70 268 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 P2RX4Q99571 388 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 GPR61Q9BZJ8 451 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 WDR90Q96KV7 1748 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 IGHV3-43A0A0B4J1X8 118 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 TMEM229AB2RXF0 380 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 UMAD1C9J7I0 102 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 NPIPB8E9PQR5 432 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 K7N7A8 449 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 IGHV3-43DP0DP04 118 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PAX5Q02548 391 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZNF770Q6IQ21 691 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 TMEM182Q6ZP80 229 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 DNM1P46Q6ZS02 220 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 HIST2H3AQ71DI3 136 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SSX7Q7RTT5 188 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PRSS45Q7RTY3 260 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZFP62Q8NB50 900 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 MARCH1Q8TCQ1 289 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZPLD1Q8TCW7 415 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 DDB2Q92466 427 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PRDM14Q9GZV8 571 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 RHOFQ9HBH0 211 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PPIAL4CA0A0B4J2A2 164 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 E9PLN8 166 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 H7BYZ3 331 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PTP4A3O75365 173 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PPIAL4GP0DN37 164 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 NQO2P16083 231 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 G0S2P27469 103 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CD226Q15762 336 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 TMEM128Q5BJH2 165 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ITLN1Q8WWA0 313 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 UCN2Q96RP3 112 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 VKORC1Q9BQB6 163 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR2J1Q9GZK6 312 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CTDSP1Q9GZU7 261 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 TMEM167BQ9NRX6 74 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 EXOGQ9Y2C4 368 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 KPTNQ9Y664 436 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SMLR1H3BR10 107 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 RAB29O14966 203 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PPP1R2P9O14990 202 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CLEC2LP0C7M8 214 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CTLA4P16410 223 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CDKN2AP42771 156 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZNF90Q03938 601 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ZNF787Q6DD87 383 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR8I2Q8N0Y5 310 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR4A4PQ8NGN8 299 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR4Q3Q8NH05 313 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SCARF2Q96GP6 870 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 TINAGL1Q9GZM7 467 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 TREM2Q9NZC2 230 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 RCL1Q9Y2P8 373 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 C7orf72A4D263 438 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 SS18L1O75177 396 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 CSF2RBP32927 897 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ACAA2P42765 397 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 RPL27AP46776 148 aaKnown RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 WNT3P56703 355 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 ISL1P61371 349 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 HLA-DRB3P79483 266 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 FAM3AP98173 230 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CDCP2Q5VXM1 449 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 DHRS7BQ6IAN0 325 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 OR13F1Q8NGS4 319 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 GUCD1Q96NT3 240 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 TCEAL7Q9BRU2 100 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 LINC00470Q9BZP3 86 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 PARP11Q9NR21 331 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CLEC5AQ9NY25 188 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CSAG2Q9Y5P2 127 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 POMT1Q9Y6A1 747 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 C19orf67A6NJJ6 358 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 LALBAP00709 142 aa3.72□□□□□ -1.81
VCAN-209ENST00000513016 CFDP00746 253 aaPredicted RBP3.72□□□□□ -1.81
VCAN-209ENST00000513016 AREGP15514 252 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms